RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SNW1Q13573 536 aaKnown RBP15.62■□□□□ 0.09
COL2A1-201ENST00000337299 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
COL2A1-201ENST00000337299 NLRP6P59044 892 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 STK38Q15208 465 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 PSMA5P28066 241 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 TSR1Q2NL82 804 aaKnown RBP15.61■□□□□ 0.09
COL2A1-201ENST00000337299 PRPF40BQ6NWY9 871 aaKnown RBP15.61■□□□□ 0.09
COL2A1-201ENST00000337299 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
COL2A1-201ENST00000337299 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 GJB2P29033 226 aa15.61■□□□□ 0.09
COL2A1-201ENST00000337299 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
COL2A1-201ENST00000337299 ZBTB22O15209 634 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
COL2A1-201ENST00000337299 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 DNAJC25Q9H1X3 360 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 FAM200AQ8TCP9 573 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 RALGAPBQ86X10 1494 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 SMTNL1A8MU46 457 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 ATP2B1P20020 1258 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
COL2A1-201ENST00000337299 NECAB1Q8N987 351 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 LIMCH1Q9UPQ0 1083 aa15.6■□□□□ 0.09
COL2A1-201ENST00000337299 ADGRL1O94910 1474 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 CFAP100Q494V2 611 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 USP26Q9BXU7 913 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 DACT1Q9NYF0 836 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 OLFM4Q6UX06 510 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 CCDC191Q8NCU4 936 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 SYTL4Q96C24 671 aaPredicted RBP15.59■□□□□ 0.09
COL2A1-201ENST00000337299 BIN1O00499 593 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
COL2A1-201ENST00000337299 CCDC70Q6NSX1 233 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
COL2A1-201ENST00000337299 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.09
COL2A1-201ENST00000337299 G3BP1Q13283 466 aaKnown RBP eCLIP15.58■□□□□ 0.09
COL2A1-201ENST00000337299 TCEANC2Q96MN5 208 aa15.58■□□□□ 0.09
COL2A1-201ENST00000337299 ELF2Q15723 593 aa15.58■□□□□ 0.08
COL2A1-201ENST00000337299 TMC6Q7Z403 805 aa15.58■□□□□ 0.08
COL2A1-201ENST00000337299 SLU7O95391 586 aaKnown RBP15.58■□□□□ 0.08
COL2A1-201ENST00000337299 FBLN1P23142 703 aa15.58■□□□□ 0.08
COL2A1-201ENST00000337299 ATP2B3Q16720 1220 aa15.58■□□□□ 0.08
COL2A1-201ENST00000337299 DNAI1Q9UI46 699 aa15.58■□□□□ 0.08
COL2A1-201ENST00000337299 KIF2AO00139 706 aaPredicted RBP15.57■□□□□ 0.08
COL2A1-201ENST00000337299 CCP110O43303 1012 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 EIF3JO75822 258 aaKnown RBP15.57■□□□□ 0.08
COL2A1-201ENST00000337299 ARHGAP29Q52LW3 1261 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 GUCY1B3Q02153 619 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 ISM2Q6H9L7 571 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 CAGE1Q8TC20 777 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 IPO7O95373 1038 aaKnown RBP15.57■□□□□ 0.08
COL2A1-201ENST00000337299 PLEKHM2Q8IWE5 1019 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 UGGT2Q9NYU1 1516 aa15.57■□□□□ 0.08
COL2A1-201ENST00000337299 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
COL2A1-201ENST00000337299 TYRO3Q06418 890 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 GABPB1Q06547 395 aaPredicted RBP15.56■□□□□ 0.08
COL2A1-201ENST00000337299 LRMPQ12912 555 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 MCM6Q14566 821 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 SULT6B1Q6IMI4 303 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 SIL1Q9H173 461 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
COL2A1-201ENST00000337299 SCAND2PQ9GZW5 306 aaPredicted RBP15.56■□□□□ 0.08
COL2A1-201ENST00000337299 RRS1Q15050 365 aaKnown RBP15.56■□□□□ 0.08
COL2A1-201ENST00000337299 LRRFIP2Q9Y608 721 aaKnown RBP15.56■□□□□ 0.08
COL2A1-201ENST00000337299 RAB11FIP3O75154 756 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 ERLIN1O75477 346 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 FAM173BQ6P4H8 233 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 RSPH14Q9UHP6 348 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 PYCARDQ9ULZ3 195 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
COL2A1-201ENST00000337299 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 FANCAO15360 1455 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
COL2A1-201ENST00000337299 SRCIN1Q9C0H9 1055 aa15.55■□□□□ 0.08
COL2A1-201ENST00000337299 MEIS3Q99687 375 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
COL2A1-201ENST00000337299 RASSF4Q9H2L5 321 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 HDAC5Q9UQL6 1122 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
COL2A1-201ENST00000337299 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 KIF14Q15058 1648 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 SYT10Q6XYQ8 523 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 MCM10Q7L590 875 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 TXLNBQ8N3L3 684 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 CFAP45Q9UL16 551 aa15.54■□□□□ 0.08
COL2A1-201ENST00000337299 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 CPA1P15085 419 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 HSP90AB4PQ58FF6 505 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 ABTB2Q8N961 1025 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 PHACTR2O75167 634 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 FCHSD2O94868 740 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 TSPYL6Q8N831 410 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-201ENST00000337299 DDX19AQ9NUU7 478 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms