RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TNS1Q9HBL0 1735 aaKnown RBP18.46■□□□□ 0.55
APOBEC3B-202ENST00000335760 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
APOBEC3B-202ENST00000335760 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
APOBEC3B-202ENST00000335760 APBA3O96018 575 aa18.44■□□□□ 0.54
APOBEC3B-202ENST00000335760 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
APOBEC3B-202ENST00000335760 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
APOBEC3B-202ENST00000335760 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
APOBEC3B-202ENST00000335760 CCDC125Q86Z20 511 aa18.43■□□□□ 0.54
APOBEC3B-202ENST00000335760 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
APOBEC3B-202ENST00000335760 BTBD11A6QL63 1104 aa18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
APOBEC3B-202ENST00000335760 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
APOBEC3B-202ENST00000335760 MIS18AQ9NYP9 233 aa18.41■□□□□ 0.54
APOBEC3B-202ENST00000335760 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
APOBEC3B-202ENST00000335760 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
APOBEC3B-202ENST00000335760 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
APOBEC3B-202ENST00000335760 PAPPAQ13219 1627 aa18.39■□□□□ 0.53
APOBEC3B-202ENST00000335760 PLSCR1O15162 318 aa18.38■□□□□ 0.53
APOBEC3B-202ENST00000335760 BAG6P46379 1132 aa18.38■□□□□ 0.53
APOBEC3B-202ENST00000335760 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
APOBEC3B-202ENST00000335760 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
APOBEC3B-202ENST00000335760 KCNQ3O43525 872 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 EN1Q05925 392 aaPredicted RBP18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 ZNF790Q6PG37 636 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
APOBEC3B-202ENST00000335760 ZNF521Q96K83 1311 aa18.36■□□□□ 0.53
APOBEC3B-202ENST00000335760 CHL1O00533 1208 aa18.36■□□□□ 0.53
APOBEC3B-202ENST00000335760 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
APOBEC3B-202ENST00000335760 GNAI1P63096 354 aa18.36■□□□□ 0.53
APOBEC3B-202ENST00000335760 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
APOBEC3B-202ENST00000335760 IL16Q14005 1332 aa18.35■□□□□ 0.53
APOBEC3B-202ENST00000335760 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
APOBEC3B-202ENST00000335760 LY75O60449 1722 aa18.35■□□□□ 0.53
APOBEC3B-202ENST00000335760 SOCS7O14512 581 aa18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 UBR2Q8IWV8 1755 aa18.34■□□□□ 0.53
APOBEC3B-202ENST00000335760 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
APOBEC3B-202ENST00000335760 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.53
APOBEC3B-202ENST00000335760 SIK1P57059 783 aa18.33■□□□□ 0.53
APOBEC3B-202ENST00000335760 TXNRD1Q16881 649 aa18.33■□□□□ 0.53
APOBEC3B-202ENST00000335760 MBIPQ9NS73 344 aa18.33■□□□□ 0.53
APOBEC3B-202ENST00000335760 GOLGA2Q08379 1002 aa18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 PROM2Q8N271 834 aa18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
APOBEC3B-202ENST00000335760 KCNQ4P56696 695 aa18.31■□□□□ 0.52
APOBEC3B-202ENST00000335760 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
APOBEC3B-202ENST00000335760 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
APOBEC3B-202ENST00000335760 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
APOBEC3B-202ENST00000335760 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 SLC27A3Q5K4L6 730 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 LRRC4BQ9NT99 713 aa18.3■□□□□ 0.52
APOBEC3B-202ENST00000335760 E9PSI1 815 aa18.29■□□□□ 0.52
APOBEC3B-202ENST00000335760 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
APOBEC3B-202ENST00000335760 CDCA7LQ96GN5 454 aa18.29■□□□□ 0.52
APOBEC3B-202ENST00000335760 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
APOBEC3B-202ENST00000335760 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
APOBEC3B-202ENST00000335760 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
APOBEC3B-202ENST00000335760 ITPK1Q13572 414 aa18.28■□□□□ 0.52
APOBEC3B-202ENST00000335760 ZNF831Q5JPB2 1677 aa18.27■□□□□ 0.52
APOBEC3B-202ENST00000335760 RREB1Q92766 1687 aa18.27■□□□□ 0.52
APOBEC3B-202ENST00000335760 TJP1Q07157 1748 aa18.27■□□□□ 0.52
APOBEC3B-202ENST00000335760 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.51
APOBEC3B-202ENST00000335760 KRT24Q2M2I5 525 aa18.27■□□□□ 0.51
APOBEC3B-202ENST00000335760 DNAJC10Q8IXB1 793 aa18.27■□□□□ 0.51
APOBEC3B-202ENST00000335760 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
APOBEC3B-202ENST00000335760 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
APOBEC3B-202ENST00000335760 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
APOBEC3B-202ENST00000335760 C5P01031 1676 aa18.25■□□□□ 0.51
APOBEC3B-202ENST00000335760 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
APOBEC3B-202ENST00000335760 TAF1LQ8IZX4 1826 aa18.25■□□□□ 0.51
APOBEC3B-202ENST00000335760 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3B-202ENST00000335760 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
APOBEC3B-202ENST00000335760 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
APOBEC3B-202ENST00000335760 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 HMGB2P26583 209 aaKnown RBP18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 EXOSC9Q06265 439 aaKnown RBP18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
APOBEC3B-202ENST00000335760 STARD3NLO95772 234 aa18.22■□□□□ 0.51
APOBEC3B-202ENST00000335760 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
APOBEC3B-202ENST00000335760 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
APOBEC3B-202ENST00000335760 C4BP0C0L5 1744 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms