RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 SPATA31A6Q5VVP1 1343 aa21.25■□□□□ 0.99
PDCD1-201ENST00000334409 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
PDCD1-201ENST00000334409 MEX3CQ5U5Q3 659 aaKnown RBP21.25■□□□□ 0.99
PDCD1-201ENST00000334409 IL2RBP14784 551 aa21.23■□□□□ 0.99
PDCD1-201ENST00000334409 RGS3P49796 1198 aa21.23■□□□□ 0.99
PDCD1-201ENST00000334409 CLUAP1Q96AJ1 413 aa21.23■□□□□ 0.99
PDCD1-201ENST00000334409 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
PDCD1-201ENST00000334409 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
PDCD1-201ENST00000334409 IL16Q14005 1332 aa21.22■□□□□ 0.99
PDCD1-201ENST00000334409 MRE11P49959 708 aa21.22■□□□□ 0.99
PDCD1-201ENST00000334409 EXOSC9Q06265 439 aaKnown RBP21.22■□□□□ 0.99
PDCD1-201ENST00000334409 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
PDCD1-201ENST00000334409 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
PDCD1-201ENST00000334409 IGHDP01880 384 aa21.22■□□□□ 0.99
PDCD1-201ENST00000334409 CYP27B1O15528 508 aa21.21■□□□□ 0.99
PDCD1-201ENST00000334409 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
PDCD1-201ENST00000334409 GNAI1P63096 354 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
PDCD1-201ENST00000334409 DDX54Q8TDD1 881 aaKnown RBP21.2■□□□□ 0.98
PDCD1-201ENST00000334409 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 ANTXR1Q9H6X2 564 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 IFT57Q9NWB7 429 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 SLIT2O94813 1529 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
PDCD1-201ENST00000334409 ZNF853P0CG23 659 aa21.2■□□□□ 0.98
PDCD1-201ENST00000334409 RARSP54136 660 aaKnown RBP21.2■□□□□ 0.98
PDCD1-201ENST00000334409 HTATSF1O43719 755 aaKnown RBP21.19■□□□□ 0.98
PDCD1-201ENST00000334409 ZCRB1Q8TBF4 217 aaKnown RBP21.19■□□□□ 0.98
PDCD1-201ENST00000334409 PHKG2P15735 406 aa21.19■□□□□ 0.98
PDCD1-201ENST00000334409 UNC5CLQ8IV45 518 aa21.19■□□□□ 0.98
PDCD1-201ENST00000334409 OVOS2A0A0G2JMS6 1433 aa21.18■□□□□ 0.98
PDCD1-201ENST00000334409 NRAPQ86VF7 1730 aa21.18■□□□□ 0.98
PDCD1-201ENST00000334409 RNMTO43148 476 aaKnown RBP21.17■□□□□ 0.98
PDCD1-201ENST00000334409 KRT24Q2M2I5 525 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 PANK1Q8TE04 598 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 USP21Q9UK80 565 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 COG6Q9Y2V7 657 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 SPATA31A1Q5TZJ5 1347 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 IFNL2Q8IZJ0 200 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 BCL9LQ86UU0 1499 aa21.17■□□□□ 0.98
PDCD1-201ENST00000334409 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
PDCD1-201ENST00000334409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDCD1-201ENST00000334409 CHL1O00533 1208 aa21.16■□□□□ 0.98
PDCD1-201ENST00000334409 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
PDCD1-201ENST00000334409 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
PDCD1-201ENST00000334409 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
PDCD1-201ENST00000334409 ESPNB1AK53 854 aa21.15■□□□□ 0.98
PDCD1-201ENST00000334409 SPATA31A5Q5VU36 1347 aa21.15■□□□□ 0.98
PDCD1-201ENST00000334409 SPATA31A7Q8IWB4 1347 aa21.15■□□□□ 0.98
PDCD1-201ENST00000334409 TEFQ10587 303 aa21.14■□□□□ 0.97
PDCD1-201ENST00000334409 C8orf58Q8NAV2 365 aa21.14■□□□□ 0.97
PDCD1-201ENST00000334409 CEMIPQ8WUJ3 1361 aa21.14■□□□□ 0.97
PDCD1-201ENST00000334409 PARP4Q9UKK3 1724 aaKnown RBP21.14■□□□□ 0.97
PDCD1-201ENST00000334409 NWD2Q9ULI1 1742 aa21.14■□□□□ 0.97
PDCD1-201ENST00000334409 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
PDCD1-201ENST00000334409 AFF2P51816 1311 aa21.13■□□□□ 0.97
PDCD1-201ENST00000334409 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
PDCD1-201ENST00000334409 FAM98CQ17RN3 349 aaKnown RBP21.12■□□□□ 0.97
PDCD1-201ENST00000334409 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
PDCD1-201ENST00000334409 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
PDCD1-201ENST00000334409 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
PDCD1-201ENST00000334409 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
PDCD1-201ENST00000334409 KCNQ3O43525 872 aa21.11■□□□□ 0.97
PDCD1-201ENST00000334409 MCM4P33991 863 aa21.11■□□□□ 0.97
PDCD1-201ENST00000334409 DISP2A7MBM2 1401 aa21.1■□□□□ 0.97
PDCD1-201ENST00000334409 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
PDCD1-201ENST00000334409 NFATC2IPQ8NCF5 419 aa21.1■□□□□ 0.97
PDCD1-201ENST00000334409 EXOC5O00471 708 aa21.1■□□□□ 0.97
PDCD1-201ENST00000334409 VPS72Q15906 364 aa21.1■□□□□ 0.97
PDCD1-201ENST00000334409 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
PDCD1-201ENST00000334409 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
PDCD1-201ENST00000334409 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
PDCD1-201ENST00000334409 A0A0G2JS52 829 aa21.08■□□□□ 0.97
PDCD1-201ENST00000334409 DCAF5Q96JK2 942 aa21.08■□□□□ 0.97
PDCD1-201ENST00000334409 MAP7D2Q96T17 732 aa21.08■□□□□ 0.97
PDCD1-201ENST00000334409 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.96
PDCD1-201ENST00000334409 TERF1P54274 439 aa21.08■□□□□ 0.96
PDCD1-201ENST00000334409 TWISTNBQ3B726 338 aaPredicted RBP21.08■□□□□ 0.96
PDCD1-201ENST00000334409 VAMP4O75379 141 aa21.07■□□□□ 0.96
PDCD1-201ENST00000334409 SLC39A6Q13433 755 aa21.07■□□□□ 0.96
PDCD1-201ENST00000334409 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
PDCD1-201ENST00000334409 KAT6BQ8WYB5 2073 aa21.07■□□□□ 0.96
PDCD1-201ENST00000334409 RLBP1P12271 317 aa21.07■□□□□ 0.96
PDCD1-201ENST00000334409 PANK2Q9BZ23 570 aa21.07■□□□□ 0.96
PDCD1-201ENST00000334409 DDB1Q16531 1140 aa21.06■□□□□ 0.96
PDCD1-201ENST00000334409 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
PDCD1-201ENST00000334409 PCDHB15Q9Y5E8 787 aa21.06■□□□□ 0.96
PDCD1-201ENST00000334409 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 HSP90AB1P08238 724 aaKnown RBP21.05■□□□□ 0.96
PDCD1-201ENST00000334409 FBXO41Q8TF61 875 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 TRIM44Q96DX7 344 aaPredicted RBP21.05■□□□□ 0.96
PDCD1-201ENST00000334409 GRPEL1Q9HAV7 217 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 CABP4P57796 275 aa21.05■□□□□ 0.96
PDCD1-201ENST00000334409 BARGINQ6ZT62 677 aa21.04■□□□□ 0.96
PDCD1-201ENST00000334409 RWDD1Q9H446 243 aaPredicted RBP21.04■□□□□ 0.96
PDCD1-201ENST00000334409 NECTIN2Q92692 538 aa21.04■□□□□ 0.96
PDCD1-201ENST00000334409 SMC4Q9NTJ3 1288 aa21.04■□□□□ 0.96
PDCD1-201ENST00000334409 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms