RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CASC1Q6TDU7 716 aa25.28■■□□□ 1.64
LINC01006-201ENST00000333319 FOXD4L1Q9NU39 408 aa25.27■■□□□ 1.64
LINC01006-201ENST00000333319 CIZ1Q9ULV3 898 aaPredicted RBP25.27■■□□□ 1.64
LINC01006-201ENST00000333319 NFAT5O94916 1531 aa25.27■■□□□ 1.64
LINC01006-201ENST00000333319 HDGFL1Q5TGJ6 251 aa25.26■■□□□ 1.63
LINC01006-201ENST00000333319 ADGRL3Q9HAR2 1447 aa25.26■■□□□ 1.63
LINC01006-201ENST00000333319 PDE1AP54750 535 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 KCNH5Q8NCM2 988 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 OSBPL3Q9H4L5 887 aa25.25■■□□□ 1.63
LINC01006-201ENST00000333319 PNMA6EA0A0J9YXQ4 647 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 CEMIPQ8WUJ3 1361 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 ATP8B2P98198 1209 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 TNPO1Q92973 898 aaKnown RBP25.24■■□□□ 1.63
LINC01006-201ENST00000333319 LGR6Q9HBX8 967 aa25.24■■□□□ 1.63
LINC01006-201ENST00000333319 TRAK2O60296 914 aa25.23■■□□□ 1.63
LINC01006-201ENST00000333319 RABEP1Q15276 862 aa25.23■■□□□ 1.63
LINC01006-201ENST00000333319 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 ZNF142P52746 1687 aaPredicted RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 RTN4Q9NQC3 1192 aaKnown RBP25.23■■□□□ 1.63
LINC01006-201ENST00000333319 DDX11L8A8MPP1 907 aa25.22■■□□□ 1.63
LINC01006-201ENST00000333319 LRRCC1Q9C099 1032 aa25.22■■□□□ 1.63
LINC01006-201ENST00000333319 LRRFIP2Q9Y608 721 aaKnown RBP25.22■■□□□ 1.63
LINC01006-201ENST00000333319 RAB3GAP1Q15042 981 aa25.21■■□□□ 1.63
LINC01006-201ENST00000333319 LRRC59Q96AG4 307 aaKnown RBP25.21■■□□□ 1.63
LINC01006-201ENST00000333319 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
LINC01006-201ENST00000333319 GZF1Q9H116 711 aaPredicted RBP25.21■■□□□ 1.63
LINC01006-201ENST00000333319 PLEKHG5O94827 1062 aa25.2■■□□□ 1.63
LINC01006-201ENST00000333319 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.63
LINC01006-201ENST00000333319 EIF4A1P60842 406 aaKnown RBP25.19■■□□□ 1.62
LINC01006-201ENST00000333319 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
LINC01006-201ENST00000333319 TSHZ3Q63HK5 1081 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 ORAI2Q96SN7 254 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 PXDNLA1KZ92 1463 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 RGPD2P0DJD1 1756 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 REC8O95072 547 aa25.19■■□□□ 1.62
LINC01006-201ENST00000333319 UBTFL1P0CB47 393 aaPredicted RBP25.18■■□□□ 1.62
LINC01006-201ENST00000333319 SALL3Q9BXA9 1300 aa25.17■■□□□ 1.62
LINC01006-201ENST00000333319 ERC2O15083 957 aa25.17■■□□□ 1.62
LINC01006-201ENST00000333319 L1TD1Q5T7N2 865 aaKnown RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 ZNF530Q6P9A1 599 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 N4BP2Q86UW6 1770 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
LINC01006-201ENST00000333319 GCP02774 474 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 GBP4Q96PP9 640 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 MX1P20591 662 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
LINC01006-201ENST00000333319 KCNQ3O43525 872 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 TEFQ10587 303 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 NPHP4O75161 1426 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
LINC01006-201ENST00000333319 LMOD2Q6P5Q4 547 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
LINC01006-201ENST00000333319 SRCIN1Q9C0H9 1055 aa25.14■■□□□ 1.62
LINC01006-201ENST00000333319 CHPF2Q9P2E5 772 aa25.14■■□□□ 1.62
LINC01006-201ENST00000333319 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.61
LINC01006-201ENST00000333319 PHRF1Q9P1Y6 1649 aaKnown RBP25.13■■□□□ 1.61
LINC01006-201ENST00000333319 BTBD11A6QL63 1104 aa25.13■■□□□ 1.61
LINC01006-201ENST00000333319 HOXB7P09629 217 aa25.13■■□□□ 1.61
LINC01006-201ENST00000333319 ARXQ96QS3 562 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 KDM3BQ7LBC6 1761 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 GOLGA6L3A6NEY3 463 aa25.12■■□□□ 1.61
LINC01006-201ENST00000333319 AMOTQ4VCS5 1084 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 SSH3Q8TE77 659 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 LMO7Q8WWI1 1683 aa25.11■■□□□ 1.61
LINC01006-201ENST00000333319 SSFA2P28290 1259 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 ADAMTSL3P82987 1691 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 FSD2A1L4K1 749 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PI4KAP2A4QPH2 592 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 ST18O60284 1047 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PPP1R42Q7Z4L9 355 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 PI4KAP1Q8N8J0 262 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 CHMP4AQ9BY43 222 aa25.1■■□□□ 1.61
LINC01006-201ENST00000333319 TRIM6-TRIM34B2RNG4 842 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 ANKRD24Q8TF21 1146 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 RILPL2Q969X0 211 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 TUBGCP6Q96RT7 1819 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 RNMTO43148 476 aaKnown RBP25.09■■□□□ 1.61
LINC01006-201ENST00000333319 ANXA1P04083 346 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 DNAAF4Q8WXU2 420 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 IL1RAPL2Q9NP60 686 aa25.09■■□□□ 1.61
LINC01006-201ENST00000333319 NBPF7P0C2Y1 421 aaPredicted RBP25.07■■□□□ 1.6
LINC01006-201ENST00000333319 BEND3Q5T5X7 828 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 ESYT1Q9BSJ8 1104 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 SLIT3O75094 1523 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 PXDNQ92626 1479 aa25.07■■□□□ 1.6
LINC01006-201ENST00000333319 SURF6O75683 361 aaKnown RBP25.06■■□□□ 1.6
LINC01006-201ENST00000333319 AK9Q5TCS8 1911 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 POLA2Q14181 598 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 AXIN2Q9Y2T1 843 aa25.06■■□□□ 1.6
LINC01006-201ENST00000333319 XRCC6P12956 609 aaKnown RBP eCLIP25.05■■□□□ 1.6
LINC01006-201ENST00000333319 CHMLP26374 656 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 SRGAP3O43295 1099 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 RAB11FIP3O75154 756 aa25.05■■□□□ 1.6
LINC01006-201ENST00000333319 NCAPD2Q15021 1401 aa25.04■■□□□ 1.6
LINC01006-201ENST00000333319 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
LINC01006-201ENST00000333319 NUTM1Q86Y26 1132 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms