RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 DDX58O95786 925 aaKnown RBP11.73□□□□□ -0.53
CSGALNACT1-201ENST00000332246 TTLL5Q6EMB2 1281 aa11.73□□□□□ -0.53
CSGALNACT1-201ENST00000332246 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ZHX1Q9UKY1 873 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 TPM2P07951 284 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 GSPT1P15170 499 aaKnown RBP11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 FKBP4Q02790 459 aaKnown RBP eCLIP11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ISM2Q6H9L7 571 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 DCTPP1Q9H773 170 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 UGGT1Q9NYU2 1555 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ARHGEF12Q9NZN5 1544 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 MCM2P49736 904 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 USP48Q86UV5 1035 aa11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
CSGALNACT1-201ENST00000332246 ADCY5O95622 1261 aa11.71□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ME1P48163 572 aa11.71□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.54
CSGALNACT1-201ENST00000332246 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PNMA6EA0A0J9YXQ4 647 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SLC39A6Q13433 755 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SMC2O95347 1197 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 C16orf45Q96MC5 204 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RRP9O43818 475 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 KRT85P78386 507 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PDE4CQ08493 712 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SKIDA1Q1XH10 827 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 GJB2P29033 226 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 NFXL1Q6ZNB6 911 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PDILTQ8N807 584 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 LRRC59Q96AG4 307 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PTPRTO14522 1441 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 GADD45BO75293 160 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 KLHDC4Q8TBB5 520 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SNX21Q969T3 373 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CWF19L2Q2TBE0 894 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 NUP62CLQ9H1M0 184 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PALD1Q9ULE6 856 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 BIN1O00499 593 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 STX6O43752 255 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
CSGALNACT1-201ENST00000332246 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 KINO60870 393 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PLEKHO1Q53GL0 409 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TMEM63CQ9P1W3 806 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 V9GYY5 206 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 ABCA8O94911 1581 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 EVA1CP58658 441 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 HAND2P61296 217 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 MYD88Q99836 296 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 MAP3K2Q9Y2U5 619 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 IL16Q14005 1332 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 MSH6P52701 1360 aa11.67□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PSMA5P28066 241 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 TPM4P67936 248 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 RALYLQ86SE5 291 aaKnown RBP11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 EYA1Q99502 592 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 KIF3AQ9Y496 699 aa11.66□□□□□ -0.54
CSGALNACT1-201ENST00000332246 INSRP06213 1382 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms