RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 G2E3Q7L622 706 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
SS18L1-201ENST00000331758 NUCB1Q02818 461 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CHL1O00533 1208 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 G3V3G9 751 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ARID3AQ99856 593 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 A0A087WZG4 1122 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 K7ELQ4 463 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 STARD3NLO95772 234 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CEP152O94986 1710 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 FOSBP53539 338 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 TRDNQ13061 729 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 MADDQ8WXG6 1647 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 RAB11FIP3O75154 756 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 SNRPA1P09661 255 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 COPS6Q7L5N1 327 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 SMC5Q8IY18 1101 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 EXOC5O00471 708 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 CPLX1O14810 134 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 GLRX3O76003 335 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■■□ 20.3
SS18L1-201ENST00000331758 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 HIP1O00291 1037 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC158Q5M9N0 1113 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.58
SS18L1-201ENST00000331758 SEC24BO95487 1268 aa11.46□□□□□ -0.58
SS18L1-201ENST00000331758 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.58
SS18L1-201ENST00000331758 TRAK2O60296 914 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 PSMA5P28066 241 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 RNMTO43148 476 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 GPTP24298 496 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 MCM2P49736 904 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 ADGRB3O60242 1522 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 TTC22Q5TAA0 569 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 SDSP20132 328 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 BICDL1Q6ZP65 573 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 RHPN1Q8TCX5 695 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 ATP7BP35670 1465 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 CYP46A1Q9Y6A2 500 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms