RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 CPA1P15085 419 aa14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 TEFQ10587 303 aa14.35□□□□□ -0.11
EFCAB13-201ENST00000331493 ROBO2Q9HCK4 1378 aa14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 CPS1P31327 1500 aa14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 RBSNQ9H1K0 784 aa14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
EFCAB13-201ENST00000331493 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 PPP1R42Q7Z4L9 355 aa14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 C9orf78Q9NZ63 289 aaPredicted RBP14.33□□□□□ -0.12
EFCAB13-201ENST00000331493 DDIT3P35638 169 aa14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 PIK3R4Q99570 1358 aa14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 FIBPO43427 364 aa14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 SIL1Q9H173 461 aa14.32□□□□□ -0.12
EFCAB13-201ENST00000331493 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 SRCIN1Q9C0H9 1055 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 PI4KAP1Q8N8J0 262 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 DIAPH3Q9NSV4 1193 aa14.31□□□□□ -0.12
EFCAB13-201ENST00000331493 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 GPT2Q8TD30 523 aa14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 TMEM63CQ9P1W3 806 aa14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 ATP7BP35670 1465 aa14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 CHMLP26374 656 aa14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 MED14O60244 1454 aa14.3□□□□□ -0.12
EFCAB13-201ENST00000331493 CFAP74Q9C0B2 1584 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 PSME1Q06323 249 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 KCNQ3O43525 872 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 IL17REQ8NFR9 667 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 JARID2Q92833 1246 aaPredicted RBP14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 TNRQ92752 1358 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 ZSCAN30Q86W11 494 aa14.29□□□□□ -0.12
EFCAB13-201ENST00000331493 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 ESCO1Q5FWF5 840 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 GLIPR1L2Q4G1C9 344 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 ZDHHC9Q9Y397 364 aa14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
EFCAB13-201ENST00000331493 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.12
EFCAB13-201ENST00000331493 ZNF530Q6P9A1 599 aaPredicted RBP14.27□□□□□ -0.12
EFCAB13-201ENST00000331493 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.12
EFCAB13-201ENST00000331493 GADD45BO75293 160 aaPredicted RBP14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 ZNF830Q96NB3 372 aaPredicted RBP14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 USP44Q9H0E7 712 aa14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 FOSBP53539 338 aa14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 SMC3Q9UQE7 1217 aa14.27□□□□□ -0.13
EFCAB13-201ENST00000331493 CASTP20810 708 aaKnown RBP14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 CCDC83Q8IWF9 413 aa14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 IL25Q9H293 177 aa14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
EFCAB13-201ENST00000331493 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 KCNA6P17658 529 aa14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 STK3Q13188 491 aa14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 SYAP1Q96A49 352 aaPredicted RBP14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 CCDC8Q9H0W5 538 aaPredicted RBP14.25□□□□□ -0.13
EFCAB13-201ENST00000331493 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 FLT4P35916 1363 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 MYL6BP14649 208 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 HOXC9P31274 260 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 CLASRPQ8N2M8 674 aaKnown RBP14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 JAKMIP1Q96N16 626 aaKnown RBP14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 FGD1P98174 961 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 TSPY26PQ9H489 355 aa14.24□□□□□ -0.13
EFCAB13-201ENST00000331493 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
EFCAB13-201ENST00000331493 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
EFCAB13-201ENST00000331493 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
EFCAB13-201ENST00000331493 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms