RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 RPGRIP1LQ68CZ1 1315 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 RAPGEF3O95398 923 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 SPC24Q8NBT2 197 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 SYAP1Q96A49 352 aaPredicted RBP9.55□□□□□ -0.88
VMA21-201ENST00000330374 MROH1Q8NDA8 1641 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 VWDEQ8N2E2 1590 aa9.55□□□□□ -0.88
VMA21-201ENST00000330374 PDE1AP54750 535 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 SETBP1Q9Y6X0 1596 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 IGSF3O75054 1194 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 HSP90B1P14625 803 aaKnown RBP9.54□□□□□ -0.88
VMA21-201ENST00000330374 RPAP2Q8IXW5 612 aaPredicted RBP9.54□□□□□ -0.88
VMA21-201ENST00000330374 HS6ST3Q8IZP7 471 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 FIBPO43427 364 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 ADCY5O95622 1261 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 ZNF853P0CG23 659 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 MCCP23508 829 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 G2E3Q7L622 706 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 CNPY2Q9Y2B0 182 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
VMA21-201ENST00000330374 BRD1O95696 1058 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 IL13P35225 146 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 PIK3R4Q99570 1358 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 MCM5P33992 734 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
VMA21-201ENST00000330374 ZC3H13Q5T200 1668 aaKnown RBP9.53□□□□□ -0.88
VMA21-201ENST00000330374 LMOD3Q0VAK6 560 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 PUS7Q96PZ0 661 aaKnown RBP9.53□□□□□ -0.88
VMA21-201ENST00000330374 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
VMA21-201ENST00000330374 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
VMA21-201ENST00000330374 RTL1A6NKG5 1358 aa9.52□□□□□ -0.88
VMA21-201ENST00000330374 CAMSAP1Q5T5Y3 1602 aa9.52□□□□□ -0.88
VMA21-201ENST00000330374 USP32Q8NFA0 1604 aa9.52□□□□□ -0.88
VMA21-201ENST00000330374 HMMRO75330 724 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 FAM212AQ96EL1 285 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 PPP4R3BQ5MIZ7 849 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
VMA21-201ENST00000330374 PNPLA6Q8IY17 1366 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 UNC5CLQ8IV45 518 aa9.52□□□□□ -0.89
VMA21-201ENST00000330374 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
VMA21-201ENST00000330374 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 CCDC94Q9BW85 323 aaPredicted RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 RIMS2Q9UQ26 1411 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 CPA1P15085 419 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 MYRIPQ8NFW9 859 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 COG3Q96JB2 828 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 PPLO60437 1756 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 YTHDC2Q9H6S0 1430 aaKnown RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 PHF14O94880 888 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 MTERF4Q7Z6M4 381 aaKnown RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 NUTM1Q86Y26 1132 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
VMA21-201ENST00000330374 ZBTB12Q9Y330 459 aaPredicted RBP9.51□□□□□ -0.89
VMA21-201ENST00000330374 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
VMA21-201ENST00000330374 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 KNDC1Q76NI1 1749 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 CD163L1Q9NR16 1453 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 SMAP1Q8IYB5 467 aaPredicted RBP9.5□□□□□ -0.89
VMA21-201ENST00000330374 IL25Q9H293 177 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 ARHGEF28Q8N1W1 1705 aaKnown RBP9.5□□□□□ -0.89
VMA21-201ENST00000330374 FOXO3O43524 673 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 MX1P20591 662 aa9.5□□□□□ -0.89
VMA21-201ENST00000330374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
VMA21-201ENST00000330374 PNMA6EA0A0J9YXQ4 647 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 LRRCC1Q9C099 1032 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 CHMLP26374 656 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 ATP2B3Q16720 1220 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 PIBF1Q8WXW3 757 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 WDR33Q9C0J8 1336 aaKnown RBP9.49□□□□□ -0.89
VMA21-201ENST00000330374 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
VMA21-201ENST00000330374 TCHHQ07283 1943 aa9.49□□□□□ -0.89
VMA21-201ENST00000330374 MCM2P49736 904 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 ABCC3O15438 1527 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 GNAI2P04899 355 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 CCDC183Q5T5S1 534 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
VMA21-201ENST00000330374 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
VMA21-201ENST00000330374 CUL4AQ13619 759 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 CAMK4Q16566 473 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 U2AF2P26368 475 aaKnown RBP eCLIP9.47□□□□□ -0.89
VMA21-201ENST00000330374 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
VMA21-201ENST00000330374 ARHGEF40Q8TER5 1519 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 DRC7Q8IY82 874 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 SPG7Q9UQ90 795 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
VMA21-201ENST00000330374 PDCL2Q8N4E4 241 aa9.47□□□□□ -0.89
VMA21-201ENST00000330374 SMC3Q9UQE7 1217 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms