RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 VGLL3A8MV65 326 aa10.04□□□□□ -0.8
SKA2-201ENST00000330137 MAPK8IP2Q13387 824 aaPredicted RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 TSR2Q969E8 191 aaKnown RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 ERO1AQ96HE7 468 aa10.04□□□□□ -0.8
SKA2-201ENST00000330137 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 U2AF1L5P0DN76 240 aaPredicted RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 U2AF1Q01081 240 aaKnown RBP eCLIP10.04□□□□□ -0.81e-7■□□□□ 9.5
SKA2-201ENST00000330137 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 GGT6Q6P531 493 aa10.04□□□□□ -0.8
SKA2-201ENST00000330137 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
SKA2-201ENST00000330137 API5Q9BZZ5 524 aaKnown RBP10.04□□□□□ -0.8
SKA2-201ENST00000330137 HTATSF1O43719 755 aaKnown RBP10.03□□□□□ -0.8
SKA2-201ENST00000330137 CAVIN2O95810 425 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
SKA2-201ENST00000330137 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 ATP8B1O43520 1251 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
SKA2-201ENST00000330137 CAPN2P17655 700 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 CDC25BP30305 580 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 MMP14P50281 582 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 TNNT1P13805 278 aa10.03□□□□□ -0.8
SKA2-201ENST00000330137 MRPL50Q8N5N7 158 aaKnown RBP10.03□□□□□ -0.8
SKA2-201ENST00000330137 TEX35Q5T0J7 233 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 TXLNBQ8N3L3 684 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 FEZ2Q9UHY8 353 aaPredicted RBP10.02□□□□□ -0.81
SKA2-201ENST00000330137 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 SDSP20132 328 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 C17orf53Q8N3J3 647 aaPredicted RBP10.02□□□□□ -0.81
SKA2-201ENST00000330137 FAM200AQ8TCP9 573 aa10.02□□□□□ -0.81
SKA2-201ENST00000330137 KIF1BO60333 1816 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 FAM177BA6PVY3 158 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 IGSF3O75054 1194 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 NOL10Q9BSC4 688 aaKnown RBP10.01□□□□□ -0.81
SKA2-201ENST00000330137 V9GYY5 206 aaPredicted RBP10.01□□□□□ -0.81
SKA2-201ENST00000330137 ELP1O95163 1332 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 PTPRMP28827 1452 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 NEK4P51957 841 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
SKA2-201ENST00000330137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.812e-10■□□□□ 10.6
SKA2-201ENST00000330137 KIF3BO15066 747 aa10□□□□□ -0.81
SKA2-201ENST00000330137 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
SKA2-201ENST00000330137 RBM6P78332 1123 aaKnown RBP10□□□□□ -0.81
SKA2-201ENST00000330137 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
SKA2-201ENST00000330137 BRMS1Q9HCU9 246 aa10□□□□□ -0.81
SKA2-201ENST00000330137 GADD45BO75293 160 aaPredicted RBP10□□□□□ -0.81
SKA2-201ENST00000330137 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
SKA2-201ENST00000330137 CEP135Q66GS9 1140 aa10□□□□□ -0.81
SKA2-201ENST00000330137 PNPLA6Q8IY17 1366 aa10□□□□□ -0.81
SKA2-201ENST00000330137 CEBPAP49715 358 aaPredicted RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 TPM4P67936 248 aa9.99□□□□□ -0.81
SKA2-201ENST00000330137 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 KNDC1Q76NI1 1749 aa9.99□□□□□ -0.81
SKA2-201ENST00000330137 CFAP65Q6ZU64 1925 aaKnown RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 VAMP4O75379 141 aa9.99□□□□□ -0.81
SKA2-201ENST00000330137 ZSCAN22P10073 491 aaPredicted RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 AXDND1Q5T1B0 1012 aaPredicted RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
SKA2-201ENST00000330137 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
SKA2-201ENST00000330137 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
SKA2-201ENST00000330137 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 FCHSD2O94868 740 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 RASSF4Q9H2L5 321 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 H2AFXP16104 143 aaPredicted RBP9.98□□□□□ -0.81
SKA2-201ENST00000330137 GPS2Q13227 327 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 ADGRB1O14514 1584 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 ZFYVE9O95405 1425 aa9.98□□□□□ -0.81
SKA2-201ENST00000330137 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
SKA2-201ENST00000330137 HNRNPH2P55795 449 aaKnown RBP9.97□□□□□ -0.81
SKA2-201ENST00000330137 SRCIN1Q9C0H9 1055 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 IFT57Q9NWB7 429 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 ATP10DQ9P241 1426 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 GNAI1P63096 354 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 RAD51AP2Q09MP3 1159 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 AGLP35573 1532 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 AP5Z1O43299 807 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 PTGS1P23219 599 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 TPD52L1Q16890 204 aaPredicted RBP9.97□□□□□ -0.81
SKA2-201ENST00000330137 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
SKA2-201ENST00000330137 PSD3Q9NYI0 1048 aa9.97□□□□□ -0.81
SKA2-201ENST00000330137 SLC4A2P04920 1241 aa9.96□□□□□ -0.81
SKA2-201ENST00000330137 TPM1P09493 284 aa9.96□□□□□ -0.81
SKA2-201ENST00000330137 KCNJ6P48051 423 aa9.96□□□□□ -0.81
SKA2-201ENST00000330137 SARM1Q6SZW1 724 aa9.96□□□□□ -0.81
SKA2-201ENST00000330137 RBM43Q6ZSC3 357 aaKnown RBP9.96□□□□□ -0.81
SKA2-201ENST00000330137 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.81
SKA2-201ENST00000330137 C16orf45Q96MC5 204 aaPredicted RBP9.96□□□□□ -0.81
SKA2-201ENST00000330137 CPSF1Q10570 1443 aaKnown RBP9.96□□□□□ -0.82
SKA2-201ENST00000330137 TNNT3P45378 269 aaPredicted RBP9.96□□□□□ -0.82
SKA2-201ENST00000330137 PTPN14Q15678 1187 aa9.96□□□□□ -0.82
SKA2-201ENST00000330137 FBXO38Q6PIJ6 1188 aa9.96□□□□□ -0.82
SKA2-201ENST00000330137 CCDC186Q7Z3E2 898 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms