RNA–Protein interactions for RNA: ENST00000329421.7

MARCKSL1-201, Transcript of MARCKS like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCKSL1, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCKSL1-201ENST00000329421 SIPA1L3O60292 1781 aaPredicted RBP33.6■■■□□ 2.97
MARCKSL1-201ENST00000329421 TAF7Q15545 349 aaPredicted RBP33.6■■■□□ 2.97
MARCKSL1-201ENST00000329421 TMOD3Q9NYL9 352 aa33.6■■■□□ 2.97
MARCKSL1-201ENST00000329421 SPINK5Q9NQ38 1064 aaPredicted RBP33.59■■■□□ 2.97
MARCKSL1-201ENST00000329421 KAT6BQ8WYB5 2073 aa33.59■■■□□ 2.97
MARCKSL1-201ENST00000329421 NHSQ6T4R5 1651 aa33.58■■■□□ 2.97
MARCKSL1-201ENST00000329421 IL16Q14005 1332 aa33.58■■■□□ 2.97
MARCKSL1-201ENST00000329421 ZNF853P0CG23 659 aa33.58■■■□□ 2.97
MARCKSL1-201ENST00000329421 CALD1Q05682 793 aaKnown RBP33.58■■■□□ 2.97
MARCKSL1-201ENST00000329421 MIS18AQ9NYP9 233 aa33.57■■■□□ 2.96
MARCKSL1-201ENST00000329421 CFAP44Q96MT7 982 aa33.56■■■□□ 2.96
MARCKSL1-201ENST00000329421 CHL1O00533 1208 aa33.55■■■□□ 2.96
MARCKSL1-201ENST00000329421 BCL11BQ9C0K0 894 aaPredicted RBP33.55■■■□□ 2.96
MARCKSL1-201ENST00000329421 TRIM37O94972 964 aa33.55■■■□□ 2.96
MARCKSL1-201ENST00000329421 IFT57Q9NWB7 429 aa33.55■■■□□ 2.96
MARCKSL1-201ENST00000329421 GOLGA2Q08379 1002 aa33.54■■■□□ 2.96
MARCKSL1-201ENST00000329421 BTBD11A6QL63 1104 aa33.53■■■□□ 2.96
MARCKSL1-201ENST00000329421 CDCA7LQ96GN5 454 aa33.53■■■□□ 2.96
MARCKSL1-201ENST00000329421 LAS1LQ9Y4W2 734 aaKnown RBP33.52■■■□□ 2.96
MARCKSL1-201ENST00000329421 SLC39A6Q13433 755 aa33.52■■■□□ 2.96
MARCKSL1-201ENST00000329421 BABAM1Q9NWV8 329 aa33.52■■■□□ 2.96
MARCKSL1-201ENST00000329421 ASAP1Q9ULH1 1129 aa33.52■■■□□ 2.96
MARCKSL1-201ENST00000329421 GNAI1P63096 354 aa33.51■■■□□ 2.95
MARCKSL1-201ENST00000329421 ATG3Q9NT62 314 aa33.51■■■□□ 2.95
MARCKSL1-201ENST00000329421 KCNQ3O43525 872 aa33.5■■■□□ 2.95
MARCKSL1-201ENST00000329421 ILDR2Q71H61 639 aa33.5■■■□□ 2.95
MARCKSL1-201ENST00000329421 MBIPQ9NS73 344 aa33.5■■■□□ 2.95
MARCKSL1-201ENST00000329421 SLFN5Q08AF3 891 aa33.48■■■□□ 2.95
MARCKSL1-201ENST00000329421 ZNF790Q6PG37 636 aa33.48■■■□□ 2.95
MARCKSL1-201ENST00000329421 TSPYL4Q9UJ04 414 aa33.48■■■□□ 2.95
MARCKSL1-201ENST00000329421 BTAF1O14981 1849 aa33.47■■■□□ 2.95
MARCKSL1-201ENST00000329421 TSR2Q969E8 191 aaKnown RBP33.47■■■□□ 2.95
MARCKSL1-201ENST00000329421 PAPPAQ13219 1627 aa33.47■■■□□ 2.95
MARCKSL1-201ENST00000329421 TRMT2AQ8IZ69 625 aaKnown RBP33.46■■■□□ 2.95
MARCKSL1-201ENST00000329421 KDM3BQ7LBC6 1761 aa33.46■■■□□ 2.95
MARCKSL1-201ENST00000329421 E9PSI1 815 aa33.45■■■□□ 2.95
MARCKSL1-201ENST00000329421 FANCIQ9NVI1 1328 aa33.44■■■□□ 2.94
MARCKSL1-201ENST00000329421 MYH16Q9H6N6 1097 aa33.42■■■□□ 2.94
MARCKSL1-201ENST00000329421 KCPQ6ZWJ8 1503 aa33.41■■■□□ 2.94
MARCKSL1-201ENST00000329421 TNS1Q9HBL0 1735 aaKnown RBP33.4■■■□□ 2.94
MARCKSL1-201ENST00000329421 EIF4A1P60842 406 aaKnown RBP33.4■■■□□ 2.94
MARCKSL1-201ENST00000329421 DUSP27Q5VZP5 1158 aa33.4■■■□□ 2.94
MARCKSL1-201ENST00000329421 ZNF496Q96IT1 587 aaPredicted RBP33.4■■■□□ 2.94
MARCKSL1-201ENST00000329421 TTC5Q8N0Z6 440 aa33.39■■■□□ 2.94
MARCKSL1-201ENST00000329421 PALLDQ8WX93 1383 aa33.39■■■□□ 2.94
MARCKSL1-201ENST00000329421 UBR2Q8IWV8 1755 aa33.39■■■□□ 2.94
MARCKSL1-201ENST00000329421 SMARCC1Q92922 1105 aaPredicted RBP33.39■■■□□ 2.94
MARCKSL1-201ENST00000329421 HEG1Q9ULI3 1381 aa33.38■■■□□ 2.93
MARCKSL1-201ENST00000329421 PTCD1O75127 700 aaKnown RBP33.38■■■□□ 2.93
MARCKSL1-201ENST00000329421 KRT24Q2M2I5 525 aa33.37■■■□□ 2.93
MARCKSL1-201ENST00000329421 APBA3O96018 575 aa33.36■■■□□ 2.93
MARCKSL1-201ENST00000329421 SLC4A9Q96Q91 983 aa33.36■■■□□ 2.93
MARCKSL1-201ENST00000329421 FMNL2Q96PY5 1086 aa33.34■■■□□ 2.93
MARCKSL1-201ENST00000329421 PLSCR1O15162 318 aa33.33■■■□□ 2.93
MARCKSL1-201ENST00000329421 LOC102724428A0A0B4J2F2 783 aa33.33■■■□□ 2.93
MARCKSL1-201ENST00000329421 SIK1P57059 783 aa33.33■■■□□ 2.93
MARCKSL1-201ENST00000329421 C8orf58Q8NAV2 365 aa33.33■■■□□ 2.93
MARCKSL1-201ENST00000329421 RBM42Q9BTD8 480 aaKnown RBP33.33■■■□□ 2.93
MARCKSL1-201ENST00000329421 EXOSC9Q06265 439 aaKnown RBP33.31■■■□□ 2.92
MARCKSL1-201ENST00000329421 TSPYL6Q8N831 410 aa33.31■■■□□ 2.92
MARCKSL1-201ENST00000329421 GIGYF1O75420 1035 aaPredicted RBP33.3■■■□□ 2.92
MARCKSL1-201ENST00000329421 LY75O60449 1722 aa33.3■■■□□ 2.92
MARCKSL1-201ENST00000329421 PRAMEF22A3QJZ6 481 aa33.29■■■□□ 2.92
MARCKSL1-201ENST00000329421 CCDC125Q86Z20 511 aa33.29■■■□□ 2.92
MARCKSL1-201ENST00000329421 VSIG10Q8N0Z9 540 aa33.29■■■□□ 2.92
MARCKSL1-201ENST00000329421 PROM2Q8N271 834 aa33.29■■■□□ 2.92
MARCKSL1-201ENST00000329421 UPF1Q92900 1129 aaKnown RBP eCLIP33.29■■■□□ 2.92
MARCKSL1-201ENST00000329421 ELL2O00472 640 aaPredicted RBP33.26■■■□□ 2.92
MARCKSL1-201ENST00000329421 SNRPA1P09661 255 aaKnown RBP33.26■■■□□ 2.92
MARCKSL1-201ENST00000329421 KCNQ4P56696 695 aa33.26■■■□□ 2.92
MARCKSL1-201ENST00000329421 ATP6V1AP38606 617 aa33.25■■■□□ 2.91
MARCKSL1-201ENST00000329421 SF3B2Q13435 895 aaKnown RBP33.25■■■□□ 2.91
MARCKSL1-201ENST00000329421 ITPK1Q13572 414 aa33.25■■■□□ 2.91
MARCKSL1-201ENST00000329421 LRRC4BQ9NT99 713 aa33.25■■■□□ 2.91
MARCKSL1-201ENST00000329421 CAMKK2Q96RR4 588 aa33.24■■■□□ 2.91
MARCKSL1-201ENST00000329421 ZNF831Q5JPB2 1677 aa33.24■■■□□ 2.91
MARCKSL1-201ENST00000329421 EN1Q05925 392 aaPredicted RBP33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 TXNRD1Q16881 649 aa33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 DEFB132Q7Z7B7 95 aa33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 DNAJC10Q8IXB1 793 aa33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 CCNL1Q9UK58 526 aaPredicted RBP33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 USP16Q9Y5T5 823 aa33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 TWISTNBQ3B726 338 aaPredicted RBP33.23■■■□□ 2.91
MARCKSL1-201ENST00000329421 C5P01031 1676 aa33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 RGPD3A6NKT7 1758 aaPredicted RBP33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 RGPD4Q7Z3J3 1758 aa33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 CICQ96RK0 1608 aaPredicted RBP33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 VAMP4O75379 141 aa33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 HOXB7P09629 217 aa33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 TJP1Q07157 1748 aa33.22■■■□□ 2.91
MARCKSL1-201ENST00000329421 BAG6P46379 1132 aa33.2■■■□□ 2.91
MARCKSL1-201ENST00000329421 SLC27A3Q5K4L6 730 aa33.2■■■□□ 2.91
MARCKSL1-201ENST00000329421 SOS1Q07889 1333 aaPredicted RBP33.19■■■□□ 2.9
MARCKSL1-201ENST00000329421 EZH2Q15910 746 aaKnown RBP33.19■■■□□ 2.9
MARCKSL1-201ENST00000329421 TEX13AQ9BXU3 409 aaPredicted RBP33.18■■■□□ 2.9
MARCKSL1-201ENST00000329421 CYP19A1P11511 503 aaPredicted RBP33.17■■■□□ 2.9
MARCKSL1-201ENST00000329421 LINC00116Q8NCU8 138 aa33.17■■■□□ 2.9
MARCKSL1-201ENST00000329421 EIF2S2P20042 333 aaKnown RBP33.14■■■□□ 2.9
MARCKSL1-201ENST00000329421 CT47B1P0C2W7 299 aaPredicted RBP33.13■■■□□ 2.89
MARCKSL1-201ENST00000329421 LAMB4A4D0S4 1761 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms