RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
GINS3-202ENST00000328514 ESYT1Q9BSJ8 1104 aa13.65□□□□□ -0.22
GINS3-202ENST00000328514 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
GINS3-202ENST00000328514 STK26Q9P289 416 aa13.64□□□□□ -0.23
GINS3-202ENST00000328514 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
GINS3-202ENST00000328514 IDI1Q13907 227 aa13.64□□□□□ -0.23
GINS3-202ENST00000328514 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
GINS3-202ENST00000328514 NUTM2DQ5VT03 806 aaPredicted RBP13.64□□□□□ -0.23
GINS3-202ENST00000328514 KIF3AQ9Y496 699 aa13.64□□□□□ -0.23
GINS3-202ENST00000328514 RPAP1Q9BWH6 1393 aaPredicted RBP13.63□□□□□ -0.23
GINS3-202ENST00000328514 CHL1O00533 1208 aa13.63□□□□□ -0.23
GINS3-202ENST00000328514 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
GINS3-202ENST00000328514 TPM3P06753 285 aa13.62□□□□□ -0.23
GINS3-202ENST00000328514 MEIS3Q99687 375 aa13.62□□□□□ -0.23
GINS3-202ENST00000328514 ALKQ9UM73 1620 aa13.62□□□□□ -0.23
GINS3-202ENST00000328514 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
GINS3-202ENST00000328514 KIF20AO95235 890 aa13.62□□□□□ -0.23
GINS3-202ENST00000328514 MX1P20591 662 aa13.62□□□□□ -0.23
GINS3-202ENST00000328514 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
GINS3-202ENST00000328514 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
GINS3-202ENST00000328514 ADCY5O95622 1261 aa13.61□□□□□ -0.23
GINS3-202ENST00000328514 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
GINS3-202ENST00000328514 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
GINS3-202ENST00000328514 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
GINS3-202ENST00000328514 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
GINS3-202ENST00000328514 KDM4AO75164 1064 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 CHMLP26374 656 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 USP25Q9UHP3 1055 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 AOX1Q06278 1338 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
GINS3-202ENST00000328514 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
GINS3-202ENST00000328514 FUCA2Q9BTY2 467 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 MYO5BQ9ULV0 1848 aa13.6□□□□□ -0.23
GINS3-202ENST00000328514 STRCQ7RTU9 1775 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
GINS3-202ENST00000328514 UBE2HP62256 183 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 ANKRD7Q92527 254 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 SRCIN1Q9C0H9 1055 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
GINS3-202ENST00000328514 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.23
GINS3-202ENST00000328514 RAPGEF3O95398 923 aa13.58□□□□□ -0.23
GINS3-202ENST00000328514 FBLN1P23142 703 aa13.58□□□□□ -0.23
GINS3-202ENST00000328514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.23
GINS3-202ENST00000328514 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
GINS3-202ENST00000328514 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
GINS3-202ENST00000328514 HSPA4P34932 840 aa13.57□□□□□ -0.24
GINS3-202ENST00000328514 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
GINS3-202ENST00000328514 PREX1Q8TCU6 1659 aa13.57□□□□□ -0.24
GINS3-202ENST00000328514 SYCP1Q15431 976 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
GINS3-202ENST00000328514 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 PRDM10Q9NQV6 1147 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 DIP2CQ9Y2E4 1556 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 APBB1O00213 710 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 GNAI2P04899 355 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
GINS3-202ENST00000328514 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
GINS3-202ENST00000328514 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 ATP2B3Q16720 1220 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 ANO2Q9NQ90 1003 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 TCHHQ07283 1943 aa13.56□□□□□ -0.24
GINS3-202ENST00000328514 CRB1P82279 1406 aa13.55□□□□□ -0.24
GINS3-202ENST00000328514 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
GINS3-202ENST00000328514 FEZ1Q99689 392 aa13.55□□□□□ -0.24
GINS3-202ENST00000328514 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
GINS3-202ENST00000328514 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
GINS3-202ENST00000328514 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
GINS3-202ENST00000328514 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 TSC1Q92574 1164 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
GINS3-202ENST00000328514 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
GINS3-202ENST00000328514 TTC14Q96N46 770 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 ARID3AQ99856 593 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 KCNF1Q9H3M0 494 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 C3P01024 1663 aa13.54□□□□□ -0.24
GINS3-202ENST00000328514 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
GINS3-202ENST00000328514 NME9Q86XW9 330 aa13.53□□□□□ -0.24
GINS3-202ENST00000328514 COG3Q96JB2 828 aa13.53□□□□□ -0.24
GINS3-202ENST00000328514 CNPY2Q9Y2B0 182 aa13.53□□□□□ -0.24
GINS3-202ENST00000328514 NEO1Q92859 1461 aa13.53□□□□□ -0.24
GINS3-202ENST00000328514 SETD1AO15047 1707 aaKnown RBP13.53□□□□□ -0.24
GINS3-202ENST00000328514 GOLGA6L6A8MZA4 724 aa13.52□□□□□ -0.24
GINS3-202ENST00000328514 STX6O43752 255 aa13.52□□□□□ -0.24
GINS3-202ENST00000328514 CBX1P83916 185 aa13.52□□□□□ -0.24
GINS3-202ENST00000328514 ATP8B2P98198 1209 aa13.52□□□□□ -0.24
GINS3-202ENST00000328514 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.24
GINS3-202ENST00000328514 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.24
GINS3-202ENST00000328514 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.24
GINS3-202ENST00000328514 N4BP2Q86UW6 1770 aaPredicted RBP13.52□□□□□ -0.24
GINS3-202ENST00000328514 RIOK3O14730 519 aaKnown RBP13.52□□□□□ -0.25
GINS3-202ENST00000328514 F13A1P00488 732 aa13.52□□□□□ -0.25
GINS3-202ENST00000328514 GNAI3P08754 354 aa13.52□□□□□ -0.25
GINS3-202ENST00000328514 SYT1P21579 422 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms