RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
COL4A5-201ENST00000328300 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
COL4A5-201ENST00000328300 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
COL4A5-201ENST00000328300 TESK2Q96S53 571 aa13.56□□□□□ -0.24
COL4A5-201ENST00000328300 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 IFIT5Q13325 482 aaKnown RBP13.55□□□□□ -0.24
COL4A5-201ENST00000328300 SLC5A1P13866 664 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
COL4A5-201ENST00000328300 SIL1Q9H173 461 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
COL4A5-201ENST00000328300 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 METTL24Q5JXM2 366 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 MYD88Q99836 296 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
COL4A5-201ENST00000328300 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 TTF1Q15361 905 aaPredicted RBP13.54□□□□□ -0.24
COL4A5-201ENST00000328300 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
COL4A5-201ENST00000328300 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
COL4A5-201ENST00000328300 KCNA6P17658 529 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
COL4A5-201ENST00000328300 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
COL4A5-201ENST00000328300 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
COL4A5-201ENST00000328300 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
COL4A5-201ENST00000328300 CWC25Q9NXE8 425 aaPredicted RBP13.53□□□□□ -0.24
COL4A5-201ENST00000328300 MRE11P49959 708 aa13.53□□□□□ -0.24
COL4A5-201ENST00000328300 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
COL4A5-201ENST00000328300 AIDAQ96BJ3 306 aa13.52□□□□□ -0.24
COL4A5-201ENST00000328300 UBAC1Q9BSL1 405 aa13.52□□□□□ -0.24
COL4A5-201ENST00000328300 RAI14Q9P0K7 980 aa13.52□□□□□ -0.24
COL4A5-201ENST00000328300 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.24
COL4A5-201ENST00000328300 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 PCMTD1Q96MG8 357 aaPredicted RBP13.52□□□□□ -0.25
COL4A5-201ENST00000328300 IKQ13123 557 aaPredicted RBP13.52□□□□□ -0.25
COL4A5-201ENST00000328300 LRP2BPQ9P2M1 347 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 STK38Q15208 465 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
COL4A5-201ENST00000328300 TDO2P48775 406 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 CCP110O43303 1012 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 LRRC59Q96AG4 307 aaKnown RBP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
COL4A5-201ENST00000328300 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 KRT85P78386 507 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
COL4A5-201ENST00000328300 A0A1W2PP64 1363 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 TRIM27P14373 513 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-201ENST00000328300 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 CCDC196A0A1B0GTZ2 297 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-201ENST00000328300 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
COL4A5-201ENST00000328300 DCTN1Q14203 1278 aa13.5□□□□□ -0.25
COL4A5-201ENST00000328300 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 LDHCP07864 332 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 GPS2Q13227 327 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 RRP12Q5JTH9 1297 aaKnown RBP13.49□□□□□ -0.25
COL4A5-201ENST00000328300 IP6K1Q92551 441 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
COL4A5-201ENST00000328300 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 MYOM2P54296 1465 aa13.49□□□□□ -0.25
COL4A5-201ENST00000328300 IL2RBP14784 551 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-201ENST00000328300 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-201ENST00000328300 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-201ENST00000328300 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 HOXB7P09629 217 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 IL1RAPL2Q9NP60 686 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
COL4A5-201ENST00000328300 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
COL4A5-201ENST00000328300 MAP3K2Q9Y2U5 619 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 AK7Q96M32 723 aa13.47□□□□□ -0.25
COL4A5-201ENST00000328300 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms