RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 DDIT3P35638 169 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 PSME1Q06323 249 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 AIMP1Q12904 312 aaKnown RBP23.14■■□□□ 1.3
SPSB1-201ENST00000328089 GDPD2Q9HCC8 539 aa23.14■■□□□ 1.3
SPSB1-201ENST00000328089 RGS12O14924 1447 aa23.14■■□□□ 1.29
SPSB1-201ENST00000328089 FLT4P35916 1363 aa23.14■■□□□ 1.29
SPSB1-201ENST00000328089 REC8O95072 547 aa23.14■■□□□ 1.29
SPSB1-201ENST00000328089 MX1P20591 662 aa23.14■■□□□ 1.29
SPSB1-201ENST00000328089 MRE11P49959 708 aa23.14■■□□□ 1.29
SPSB1-201ENST00000328089 FSD2A1L4K1 749 aa23.13■■□□□ 1.29
SPSB1-201ENST00000328089 RIMBP3CA6NJZ7 1639 aa23.13■■□□□ 1.29
SPSB1-201ENST00000328089 RIMBP3BA6NNM3 1639 aa23.13■■□□□ 1.29
SPSB1-201ENST00000328089 RIMBP3Q9UFD9 1639 aa23.13■■□□□ 1.29
SPSB1-201ENST00000328089 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
SPSB1-201ENST00000328089 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 NBPF7P0C2Y1 421 aaPredicted RBP23.12■■□□□ 1.29
SPSB1-201ENST00000328089 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
SPSB1-201ENST00000328089 CHPF2Q9P2E5 772 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 SPATA31D1Q6ZQQ2 1576 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 MPNDQ8N594 471 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 IL25Q9H293 177 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 CRB1P82279 1406 aa23.12■■□□□ 1.29
SPSB1-201ENST00000328089 NBPF6Q5VWK0 638 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 NBPF4Q96M43 638 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 PPP1R42Q7Z4L9 355 aa23.11■■□□□ 1.29
SPSB1-201ENST00000328089 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
SPSB1-201ENST00000328089 USP44Q9H0E7 712 aa23.1■■□□□ 1.29
SPSB1-201ENST00000328089 RNF214Q8ND24 703 aa23.1■■□□□ 1.29
SPSB1-201ENST00000328089 CCDC9Q9Y3X0 531 aaKnown RBP23.1■■□□□ 1.29
SPSB1-201ENST00000328089 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
SPSB1-201ENST00000328089 TEFQ10587 303 aa23.09■■□□□ 1.29
SPSB1-201ENST00000328089 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
SPSB1-201ENST00000328089 JARID2Q92833 1246 aaPredicted RBP23.09■■□□□ 1.29
SPSB1-201ENST00000328089 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
SPSB1-201ENST00000328089 OVOS2A0A0J9YW53 1432 aa23.09■■□□□ 1.29
SPSB1-201ENST00000328089 OVOS2Q6IE36 1432 aa23.09■■□□□ 1.29
SPSB1-201ENST00000328089 CPA1P15085 419 aa23.08■■□□□ 1.29
SPSB1-201ENST00000328089 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.29
SPSB1-201ENST00000328089 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.29
SPSB1-201ENST00000328089 GNAI3P08754 354 aa23.07■■□□□ 1.28
SPSB1-201ENST00000328089 SIRT1Q96EB6 747 aa23.07■■□□□ 1.28
SPSB1-201ENST00000328089 CEP170BQ9Y4F5 1589 aaPredicted RBP23.07■■□□□ 1.28
SPSB1-201ENST00000328089 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
SPSB1-201ENST00000328089 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
SPSB1-201ENST00000328089 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
SPSB1-201ENST00000328089 CWC27Q6UX04 472 aaKnown RBP23.06■■□□□ 1.28
SPSB1-201ENST00000328089 TMX3Q96JJ7 454 aa23.06■■□□□ 1.28
SPSB1-201ENST00000328089 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
SPSB1-201ENST00000328089 IGSF1Q8N6C5 1336 aa23.06■■□□□ 1.28
SPSB1-201ENST00000328089 PA2G4Q9UQ80 394 aaKnown RBP23.06■■□□□ 1.28
SPSB1-201ENST00000328089 NSFL1CQ9UNZ2 370 aaKnown RBP23.05■■□□□ 1.28
SPSB1-201ENST00000328089 PHF8Q9UPP1 1060 aa23.05■■□□□ 1.28
SPSB1-201ENST00000328089 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
SPSB1-201ENST00000328089 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
SPSB1-201ENST00000328089 ERBB4Q15303 1308 aa23.05■■□□□ 1.28
SPSB1-201ENST00000328089 NASPP49321 788 aaPredicted RBP23.04■■□□□ 1.28
SPSB1-201ENST00000328089 ZC3H6P61129 1189 aaKnown RBP23.04■■□□□ 1.28
SPSB1-201ENST00000328089 ESYT1Q9BSJ8 1104 aa23.04■■□□□ 1.28
SPSB1-201ENST00000328089 SRCIN1Q9C0H9 1055 aa23.04■■□□□ 1.28
SPSB1-201ENST00000328089 ATP8B2P98198 1209 aa23.04■■□□□ 1.28
SPSB1-201ENST00000328089 SIL1Q9H173 461 aa23.04■■□□□ 1.28
SPSB1-201ENST00000328089 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
SPSB1-201ENST00000328089 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
SPSB1-201ENST00000328089 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
SPSB1-201ENST00000328089 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
SPSB1-201ENST00000328089 CHMLP26374 656 aa23.02■■□□□ 1.28
SPSB1-201ENST00000328089 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
SPSB1-201ENST00000328089 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
SPSB1-201ENST00000328089 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.27
SPSB1-201ENST00000328089 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
SPSB1-201ENST00000328089 NCOA3Q9Y6Q9 1424 aa23.01■■□□□ 1.27
SPSB1-201ENST00000328089 AGLP35573 1532 aa23.01■■□□□ 1.27
SPSB1-201ENST00000328089 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
SPSB1-201ENST00000328089 ZDHHC9Q9Y397 364 aa23.01■■□□□ 1.27
SPSB1-201ENST00000328089 NUCB2P80303 420 aa23.01■■□□□ 1.27
SPSB1-201ENST00000328089 SYCE3A1L190 88 aa23■■□□□ 1.27
SPSB1-201ENST00000328089 SLC39A6Q13433 755 aa23■■□□□ 1.27
SPSB1-201ENST00000328089 ANP32BQ92688 251 aaKnown RBP23■■□□□ 1.27
SPSB1-201ENST00000328089 SOS1Q07889 1333 aaPredicted RBP23■■□□□ 1.27
SPSB1-201ENST00000328089 SKOR2Q2VWA4 1001 aaPredicted RBP23■■□□□ 1.27
SPSB1-201ENST00000328089 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
SPSB1-201ENST00000328089 MYL6BP14649 208 aa22.99■■□□□ 1.27
SPSB1-201ENST00000328089 TECPR2O15040 1411 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 MCCP23508 829 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
SPSB1-201ENST00000328089 KLHDC4Q8TBB5 520 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 ESPNB1AK53 854 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
SPSB1-201ENST00000328089 ZSCAN23Q3MJ62 389 aa22.97■■□□□ 1.27
SPSB1-201ENST00000328089 RHPN1Q8TCX5 695 aa22.97■■□□□ 1.27
SPSB1-201ENST00000328089 LMBRD1Q9NUN5 540 aa22.97■■□□□ 1.27
SPSB1-201ENST00000328089 PEAK1Q9H792 1746 aa22.97■■□□□ 1.27
SPSB1-201ENST00000328089 GPT2Q8TD30 523 aa22.97■■□□□ 1.27
SPSB1-201ENST00000328089 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
SPSB1-201ENST00000328089 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms