RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FEZ1Q99689 392 aa15.42■□□□□ 0.06
CCDC60-201ENST00000327554 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
CCDC60-201ENST00000327554 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
CCDC60-201ENST00000327554 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
CCDC60-201ENST00000327554 FBLN1P23142 703 aa15.41■□□□□ 0.06
CCDC60-201ENST00000327554 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
CCDC60-201ENST00000327554 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
CCDC60-201ENST00000327554 CNPY2Q9Y2B0 182 aa15.41■□□□□ 0.06
CCDC60-201ENST00000327554 MEIS3Q99687 375 aa15.41■□□□□ 0.06
CCDC60-201ENST00000327554 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
CCDC60-201ENST00000327554 MCCP23508 829 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 OGFRQ9NZT2 677 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 PTPRMP28827 1452 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 TPM3P06753 285 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
CCDC60-201ENST00000327554 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
CCDC60-201ENST00000327554 UBE2HP62256 183 aa15.39■□□□□ 0.05
CCDC60-201ENST00000327554 TAF3Q5VWG9 929 aa15.39■□□□□ 0.05
CCDC60-201ENST00000327554 UPF3BQ9BZI7 483 aaKnown RBP15.39■□□□□ 0.05
CCDC60-201ENST00000327554 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
CCDC60-201ENST00000327554 TMEM51Q9NW97 253 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 KIAA0232Q92628 1395 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 TSHZ3Q63HK5 1081 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
CCDC60-201ENST00000327554 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
CCDC60-201ENST00000327554 SYCP1Q15431 976 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
CCDC60-201ENST00000327554 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
CCDC60-201ENST00000327554 MINK1Q8N4C8 1332 aaPredicted RBP15.37■□□□□ 0.05
CCDC60-201ENST00000327554 ZSCAN22P10073 491 aaPredicted RBP15.37■□□□□ 0.05
CCDC60-201ENST00000327554 CHMLP26374 656 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 IL13P35225 146 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 STK26Q9P289 416 aa15.37■□□□□ 0.05
CCDC60-201ENST00000327554 ZNF771Q7L3S4 317 aaPredicted RBP15.36■□□□□ 0.05
CCDC60-201ENST00000327554 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
CCDC60-201ENST00000327554 TPRNQ4KMQ1 711 aa15.36■□□□□ 0.05
CCDC60-201ENST00000327554 HMMRO75330 724 aa15.35■□□□□ 0.05
CCDC60-201ENST00000327554 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
CCDC60-201ENST00000327554 CGNQ9P2M7 1197 aaKnown RBP15.35■□□□□ 0.05
CCDC60-201ENST00000327554 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
CCDC60-201ENST00000327554 PTPRCP08575 1304 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 PREX1Q8TCU6 1659 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
CCDC60-201ENST00000327554 SLFN14P0C7P3 912 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 PTGS1P23219 599 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 EMILIN1Q9Y6C2 1016 aa15.34■□□□□ 0.05
CCDC60-201ENST00000327554 FIBPO43427 364 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC60-201ENST00000327554 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 STX6O43752 255 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 F13A1P00488 732 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 SYT1P21579 422 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
CCDC60-201ENST00000327554 MYO5BQ9ULV0 1848 aa15.32■□□□□ 0.04
CCDC60-201ENST00000327554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC60-201ENST00000327554 PRAM1Q96QH2 718 aa15.32■□□□□ 0.04
CCDC60-201ENST00000327554 IL25Q9H293 177 aa15.32■□□□□ 0.04
CCDC60-201ENST00000327554 HSPA4P34932 840 aa15.32■□□□□ 0.04
CCDC60-201ENST00000327554 EXOC6BQ9Y2D4 811 aa15.32■□□□□ 0.04
CCDC60-201ENST00000327554 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
CCDC60-201ENST00000327554 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
CCDC60-201ENST00000327554 NAA30Q147X3 362 aaPredicted RBP15.31■□□□□ 0.04
CCDC60-201ENST00000327554 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
CCDC60-201ENST00000327554 TTC14Q96N46 770 aa15.31■□□□□ 0.04
CCDC60-201ENST00000327554 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
CCDC60-201ENST00000327554 LRMPQ12912 555 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 C16orf45Q96MC5 204 aaPredicted RBP15.29■□□□□ 0.04
CCDC60-201ENST00000327554 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 ZBTB22O15209 634 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 HAP1P54257 671 aaPredicted RBP15.29■□□□□ 0.04
CCDC60-201ENST00000327554 KIF18AQ8NI77 898 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 LRRCC1Q9C099 1032 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
CCDC60-201ENST00000327554 CCDC186Q7Z3E2 898 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 FAM200AQ8TCP9 573 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 CHL1O00533 1208 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
CCDC60-201ENST00000327554 GGT6Q6P531 493 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
CCDC60-201ENST00000327554 ATP7BP35670 1465 aa15.28■□□□□ 0.04
CCDC60-201ENST00000327554 TNNT1P13805 278 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 AK2P54819 239 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 PDE4CQ08493 712 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 TERF2Q15554 542 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
CCDC60-201ENST00000327554 SNX14Q9Y5W7 946 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms