RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 DCAF8Q5TAQ9 597 aa16.15■□□□□ 0.18
LIN28A-202ENST00000326279 FOXD4L3Q6VB84 417 aaPredicted RBP16.15■□□□□ 0.18
LIN28A-202ENST00000326279 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
LIN28A-202ENST00000326279 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
LIN28A-202ENST00000326279 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
LIN28A-202ENST00000326279 DNAAF4Q8WXU2 420 aa16.13■□□□□ 0.17
LIN28A-202ENST00000326279 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
LIN28A-202ENST00000326279 ANO2Q9NQ90 1003 aa16.13■□□□□ 0.17
LIN28A-202ENST00000326279 A0A087WZG4 1122 aa16.13■□□□□ 0.17
LIN28A-202ENST00000326279 AAMPQ13685 434 aa16.13■□□□□ 0.17
LIN28A-202ENST00000326279 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
LIN28A-202ENST00000326279 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
LIN28A-202ENST00000326279 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
LIN28A-202ENST00000326279 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 PREX1Q8TCU6 1659 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
LIN28A-202ENST00000326279 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
LIN28A-202ENST00000326279 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
LIN28A-202ENST00000326279 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
LIN28A-202ENST00000326279 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
LIN28A-202ENST00000326279 SF3B2Q13435 895 aaKnown RBP16.11■□□□□ 0.17
LIN28A-202ENST00000326279 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
LIN28A-202ENST00000326279 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
LIN28A-202ENST00000326279 ERBB3P21860 1342 aa16.11■□□□□ 0.17
LIN28A-202ENST00000326279 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
LIN28A-202ENST00000326279 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
LIN28A-202ENST00000326279 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
LIN28A-202ENST00000326279 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
LIN28A-202ENST00000326279 VPS37DQ86XT2 251 aa16.1■□□□□ 0.17
LIN28A-202ENST00000326279 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
LIN28A-202ENST00000326279 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
LIN28A-202ENST00000326279 MRPL50Q8N5N7 158 aaKnown RBP16.09■□□□□ 0.17
LIN28A-202ENST00000326279 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
LIN28A-202ENST00000326279 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
LIN28A-202ENST00000326279 CNNM1Q9NRU3 951 aa16.09■□□□□ 0.17
LIN28A-202ENST00000326279 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.17
LIN28A-202ENST00000326279 GCC1Q96CN9 775 aa16.08■□□□□ 0.17
LIN28A-202ENST00000326279 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.17
LIN28A-202ENST00000326279 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
LIN28A-202ENST00000326279 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
LIN28A-202ENST00000326279 CHL1O00533 1208 aa16.08■□□□□ 0.16
LIN28A-202ENST00000326279 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
LIN28A-202ENST00000326279 MROH2AA6NES4 1674 aa16.08■□□□□ 0.16
LIN28A-202ENST00000326279 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
LIN28A-202ENST00000326279 ASAP1Q9ULH1 1129 aa16.08■□□□□ 0.16
LIN28A-202ENST00000326279 INSRP06213 1382 aa16.07■□□□□ 0.16
LIN28A-202ENST00000326279 IL16Q14005 1332 aa16.07■□□□□ 0.16
LIN28A-202ENST00000326279 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
LIN28A-202ENST00000326279 PHKG2P15735 406 aa16.06■□□□□ 0.16
LIN28A-202ENST00000326279 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
LIN28A-202ENST00000326279 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
LIN28A-202ENST00000326279 CCDC8Q9H0W5 538 aaPredicted RBP16.05■□□□□ 0.16
LIN28A-202ENST00000326279 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
LIN28A-202ENST00000326279 ATP7BP35670 1465 aa16.05■□□□□ 0.16
LIN28A-202ENST00000326279 C1orf167Q5SNV9 1468 aa16.05■□□□□ 0.16
LIN28A-202ENST00000326279 SPATA31D1Q6ZQQ2 1576 aa16.05■□□□□ 0.16
LIN28A-202ENST00000326279 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
LIN28A-202ENST00000326279 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
LIN28A-202ENST00000326279 ZPR1O75312 459 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 APPP05067 770 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
LIN28A-202ENST00000326279 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 CDC45O75419 566 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 HSPA1LP34931 641 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
LIN28A-202ENST00000326279 AACSQ86V21 672 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 ADGRB1O14514 1584 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 PPP1R42Q7Z4L9 355 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 CPS1P31327 1500 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
LIN28A-202ENST00000326279 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
LIN28A-202ENST00000326279 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 MPHOSPH8Q99549 860 aa16.03■□□□□ 0.16
LIN28A-202ENST00000326279 CYP27B1O15528 508 aa16.02■□□□□ 0.16
LIN28A-202ENST00000326279 ST18O60284 1047 aa16.02■□□□□ 0.16
LIN28A-202ENST00000326279 REC8O95072 547 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 PLCB2Q00722 1185 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 KIF13AQ9H1H9 1805 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.15
LIN28A-202ENST00000326279 WASHC4Q2M389 1173 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.15
LIN28A-202ENST00000326279 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.15
LIN28A-202ENST00000326279 USP19O94966 1318 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms