RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 CYP27B1O15528 508 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 MRE11P49959 708 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 GAS2L3Q86XJ1 694 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 FTSJ3Q8IY81 847 aaKnown RBP12.89□□□□□ -0.35
ABCF1-201ENST00000326195 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 CABP4P57796 275 aa12.88□□□□□ -0.35
ABCF1-201ENST00000326195 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
ABCF1-201ENST00000326195 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
ABCF1-201ENST00000326195 KCNQ2O43526 872 aa12.88□□□□□ -0.35
ABCF1-201ENST00000326195 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
ABCF1-201ENST00000326195 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
ABCF1-201ENST00000326195 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
ABCF1-201ENST00000326195 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
ABCF1-201ENST00000326195 ARID3AQ99856 593 aa12.87□□□□□ -0.35
ABCF1-201ENST00000326195 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 TPM2P07951 284 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 FGD1P98174 961 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
ABCF1-201ENST00000326195 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
ABCF1-201ENST00000326195 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
ABCF1-201ENST00000326195 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
ABCF1-201ENST00000326195 GJD4Q96KN9 370 aaPredicted RBP12.85□□□□□ -0.35
ABCF1-201ENST00000326195 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
ABCF1-201ENST00000326195 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
ABCF1-201ENST00000326195 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
ABCF1-201ENST00000326195 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
ABCF1-201ENST00000326195 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
ABCF1-201ENST00000326195 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
ABCF1-201ENST00000326195 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
ABCF1-201ENST00000326195 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.35
ABCF1-201ENST00000326195 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.35
ABCF1-201ENST00000326195 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.36
ABCF1-201ENST00000326195 PHKG2P15735 406 aa12.83□□□□□ -0.36
ABCF1-201ENST00000326195 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
ABCF1-201ENST00000326195 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
ABCF1-201ENST00000326195 SPATA31A6Q5VVP1 1343 aa12.83□□□□□ -0.36
ABCF1-201ENST00000326195 MYL6BP14649 208 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-201ENST00000326195 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 SPATA31A1Q5TZJ5 1347 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 LRP6O75581 1613 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
ABCF1-201ENST00000326195 TRIM37O94972 964 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-201ENST00000326195 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
ABCF1-201ENST00000326195 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
ABCF1-201ENST00000326195 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 MEGF6O75095 1541 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 RXRBP28702 533 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 SLC4A10Q6U841 1118 aa12.81□□□□□ -0.36
ABCF1-201ENST00000326195 NFAT5O94916 1531 aa12.8□□□□□ -0.36
ABCF1-201ENST00000326195 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
ABCF1-201ENST00000326195 CPDO75976 1380 aa12.8□□□□□ -0.36
ABCF1-201ENST00000326195 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
ABCF1-201ENST00000326195 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
ABCF1-201ENST00000326195 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
ABCF1-201ENST00000326195 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
ABCF1-201ENST00000326195 GNAI1P63096 354 aa12.79□□□□□ -0.36
ABCF1-201ENST00000326195 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
ABCF1-201ENST00000326195 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
ABCF1-201ENST00000326195 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
ABCF1-201ENST00000326195 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 CRB1P82279 1406 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 VPS72Q15906 364 aa12.78□□□□□ -0.36
ABCF1-201ENST00000326195 UTRNP46939 3433 aa12.77□□□□□ -0.36
ABCF1-201ENST00000326195 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.36
ABCF1-201ENST00000326195 ZNF496Q96IT1 587 aaPredicted RBP12.77□□□□□ -0.36
ABCF1-201ENST00000326195 PIGBQ92521 554 aa12.77□□□□□ -0.37
ABCF1-201ENST00000326195 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-201ENST00000326195 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 OFD1O75665 1012 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
ABCF1-201ENST00000326195 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
ABCF1-201ENST00000326195 LTN1O94822 1766 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
ABCF1-201ENST00000326195 R3HCC1Q9Y3T6 440 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms