RNA–Protein interactions for RNA: ENST00000325558.10

PGA3-201, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGA3, Length 1,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-201ENST00000325558 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
PGA3-201ENST00000325558 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
PGA3-201ENST00000325558 ZNF530Q6P9A1 599 aaPredicted RBP14.23□□□□□ -0.13
PGA3-201ENST00000325558 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
PGA3-201ENST00000325558 FLIIQ13045 1269 aa14.22□□□□□ -0.13
PGA3-201ENST00000325558 CEP85Q6P2H3 762 aa14.22□□□□□ -0.13
PGA3-201ENST00000325558 MEIS3Q99687 375 aa14.22□□□□□ -0.13
PGA3-201ENST00000325558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
PGA3-201ENST00000325558 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
PGA3-201ENST00000325558 PXDNLA1KZ92 1463 aa14.22□□□□□ -0.13
PGA3-201ENST00000325558 ZC3H6P61129 1189 aaKnown RBP14.21□□□□□ -0.13
PGA3-201ENST00000325558 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.13
PGA3-201ENST00000325558 SCN11AQ9UI33 1791 aa14.21□□□□□ -0.13
PGA3-201ENST00000325558 KCNQ3O43525 872 aa14.21□□□□□ -0.14
PGA3-201ENST00000325558 STK31Q9BXU1 1019 aa14.21□□□□□ -0.14
PGA3-201ENST00000325558 LNPKQ9C0E8 428 aa14.21□□□□□ -0.14
PGA3-201ENST00000325558 F6X3S4 739 aa14.2□□□□□ -0.14
PGA3-201ENST00000325558 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 ZBTB7CA1YPR0 619 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 MPRIPQ6WCQ1 1025 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
PGA3-201ENST00000325558 CABLES1Q8TDN4 633 aa14.18□□□□□ -0.14
PGA3-201ENST00000325558 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
PGA3-201ENST00000325558 MEGF6O75095 1541 aa14.18□□□□□ -0.14
PGA3-201ENST00000325558 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
PGA3-201ENST00000325558 HDGFL1Q5TGJ6 251 aa14.17□□□□□ -0.14
PGA3-201ENST00000325558 CHMP4AQ9BY43 222 aa14.17□□□□□ -0.14
PGA3-201ENST00000325558 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
PGA3-201ENST00000325558 KDM6AO15550 1401 aaPredicted RBP14.17□□□□□ -0.14
PGA3-201ENST00000325558 MRC1P22897 1456 aa14.16□□□□□ -0.14
PGA3-201ENST00000325558 GIGYF1O75420 1035 aaPredicted RBP14.16□□□□□ -0.14
PGA3-201ENST00000325558 TEFQ10587 303 aa14.16□□□□□ -0.14
PGA3-201ENST00000325558 C1orf141Q5JVX7 400 aa14.16□□□□□ -0.14
PGA3-201ENST00000325558 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
PGA3-201ENST00000325558 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
PGA3-201ENST00000325558 USP44Q9H0E7 712 aa14.15□□□□□ -0.14
PGA3-201ENST00000325558 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
PGA3-201ENST00000325558 NHSL1Q5SYE7 1610 aa14.15□□□□□ -0.14
PGA3-201ENST00000325558 ABCA3Q99758 1704 aa14.15□□□□□ -0.14
PGA3-201ENST00000325558 PHKG2P15735 406 aa14.15□□□□□ -0.14
PGA3-201ENST00000325558 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
PGA3-201ENST00000325558 GNAI2P04899 355 aa14.14□□□□□ -0.15
PGA3-201ENST00000325558 ATP8B2P98198 1209 aa14.14□□□□□ -0.15
PGA3-201ENST00000325558 GNAI3P08754 354 aa14.13□□□□□ -0.15
PGA3-201ENST00000325558 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
PGA3-201ENST00000325558 IBTKQ9P2D0 1353 aaPredicted RBP14.13□□□□□ -0.15
PGA3-201ENST00000325558 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
PGA3-201ENST00000325558 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 NLRP2Q9NX02 1062 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
PGA3-201ENST00000325558 ADCY9O60503 1353 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 CYP27B1O15528 508 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 SLC52A2Q9HAB3 445 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
PGA3-201ENST00000325558 SALL3Q9BXA9 1300 aa14.11□□□□□ -0.15
PGA3-201ENST00000325558 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
PGA3-201ENST00000325558 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
PGA3-201ENST00000325558 PDIA6Q15084 440 aa14.11□□□□□ -0.15
PGA3-201ENST00000325558 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
PGA3-201ENST00000325558 OSBPL3Q9H4L5 887 aa14.11□□□□□ -0.15
PGA3-201ENST00000325558 DBF4Q9UBU7 674 aaPredicted RBP14.11□□□□□ -0.15
PGA3-201ENST00000325558 TUBGCP6Q96RT7 1819 aa14.11□□□□□ -0.15
PGA3-201ENST00000325558 HMMRO75330 724 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 MYT1Q01538 1121 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 IFNL2Q8IZJ0 200 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 C5P01031 1676 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 GLI3P10071 1580 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
PGA3-201ENST00000325558 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
PGA3-201ENST00000325558 COL5A2P05997 1499 aaPredicted RBP14.09□□□□□ -0.15
PGA3-201ENST00000325558 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 PNMA6EA0A0J9YXQ4 647 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 POLA2Q14181 598 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 TTC22Q5TAA0 569 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 DNAAF4Q8WXU2 420 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 C22orf23Q9BZE7 217 aa14.09□□□□□ -0.15
PGA3-201ENST00000325558 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 PROSER3Q2NL68 480 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 LRP10Q7Z4F1 713 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 OTUD7AQ8TE49 926 aaPredicted RBP14.08□□□□□ -0.16
PGA3-201ENST00000325558 SRCIN1Q9C0H9 1055 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 UPF2Q9HAU5 1272 aaKnown RBP14.08□□□□□ -0.16
PGA3-201ENST00000325558 SHANK3Q9BYB0 1731 aa14.08□□□□□ -0.16
PGA3-201ENST00000325558 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
PGA3-201ENST00000325558 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
PGA3-201ENST00000325558 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
PGA3-201ENST00000325558 TBC1D9Q6ZT07 1266 aa14.07□□□□□ -0.16
PGA3-201ENST00000325558 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms