RNA–Protein interactions for RNA: ENST00000325134.9

ZNF550-201, Transcript of zinc finger protein 550, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF550, Length 4,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-201ENST00000325134 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
ZNF550-201ENST00000325134 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
ZNF550-201ENST00000325134 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 ZNF445P59923 1031 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 PKP1Q13835 747 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 CNPY2Q9Y2B0 182 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 HIP1O00291 1037 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
ZNF550-201ENST00000325134 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
ZNF550-201ENST00000325134 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 UBE2HP62256 183 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
ZNF550-201ENST00000325134 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
ZNF550-201ENST00000325134 RAB11FIP3O75154 756 aa13.33□□□□□ -0.27
ZNF550-201ENST00000325134 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.27
ZNF550-201ENST00000325134 DDX11Q96FC9 970 aa13.33□□□□□ -0.27
ZNF550-201ENST00000325134 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.27
ZNF550-201ENST00000325134 CD109Q6YHK3 1445 aa13.33□□□□□ -0.27
ZNF550-201ENST00000325134 SMC2O95347 1197 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 PSME1Q06323 249 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
ZNF550-201ENST00000325134 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 GJB2P29033 226 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 UVSSAQ2YD98 709 aa13.33□□□□□ -0.28
ZNF550-201ENST00000325134 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
ZNF550-201ENST00000325134 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
ZNF550-201ENST00000325134 ME1P48163 572 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
ZNF550-201ENST00000325134 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
ZNF550-201ENST00000325134 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 ANAPC15P60006 121 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
ZNF550-201ENST00000325134 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
ZNF550-201ENST00000325134 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
ZNF550-201ENST00000325134 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-201ENST00000325134 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 SYNMO15061 1565 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 APPP05067 770 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-201ENST00000325134 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
ZNF550-201ENST00000325134 SCAND2PQ9GZW5 306 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-201ENST00000325134 ATP10AO60312 1499 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 KDM4AO75164 1064 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 CHMLP26374 656 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
ZNF550-201ENST00000325134 WASHC4Q2M389 1173 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 ARGLU1Q9NWB6 273 aaPredicted RBP13.29□□□□□ -0.28
ZNF550-201ENST00000325134 TNNT1P13805 278 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
ZNF550-201ENST00000325134 STK38Q15208 465 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
ZNF550-201ENST00000325134 KDM5AP29375 1690 aaKnown RBP13.29□□□□□ -0.28
ZNF550-201ENST00000325134 TEX35Q5T0J7 233 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 G2E3Q7L622 706 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
ZNF550-201ENST00000325134 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 INTS4Q96HW7 963 aaKnown RBP13.28□□□□□ -0.28
ZNF550-201ENST00000325134 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 FOXO3O43524 673 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 DTNBO60941 627 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 TRDNQ13061 729 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 SBNO2Q9Y2G9 1366 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 RALYLQ86SE5 291 aaKnown RBP13.28□□□□□ -0.28
ZNF550-201ENST00000325134 ZNF396Q96N95 335 aaPredicted RBP13.28□□□□□ -0.28
ZNF550-201ENST00000325134 MSH6P52701 1360 aa13.28□□□□□ -0.28
ZNF550-201ENST00000325134 ANXA1P04083 346 aa13.27□□□□□ -0.28
ZNF550-201ENST00000325134 TRIM29Q14134 588 aa13.27□□□□□ -0.28
ZNF550-201ENST00000325134 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.28
ZNF550-201ENST00000325134 TRPM1Q7Z4N2 1603 aa13.27□□□□□ -0.28
ZNF550-201ENST00000325134 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.28
ZNF550-201ENST00000325134 PPIP5K1Q6PFW1 1433 aa13.27□□□□□ -0.28
ZNF550-201ENST00000325134 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.28
ZNF550-201ENST00000325134 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.28
ZNF550-201ENST00000325134 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms