RNA–Protein interactions for RNA: ENST00000324866.11

LRTOMT-203, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-203ENST00000324866 MEIS3Q99687 375 aa11.27□□□□□ -0.6
LRTOMT-203ENST00000324866 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.6
LRTOMT-203ENST00000324866 FLIIQ13045 1269 aa11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 PROSER2Q86WR7 435 aaPredicted RBP11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 ANTXR1Q9H6X2 564 aa11.27□□□□□ -0.61
LRTOMT-203ENST00000324866 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
LRTOMT-203ENST00000324866 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
LRTOMT-203ENST00000324866 SNX21Q969T3 373 aa11.26□□□□□ -0.61
LRTOMT-203ENST00000324866 GNAI3P08754 354 aa11.26□□□□□ -0.61
LRTOMT-203ENST00000324866 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
LRTOMT-203ENST00000324866 CRYBG1Q9Y4K1 1723 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 CDC45O75419 566 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 GNAI2P04899 355 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 EIF4A1P60842 406 aaKnown RBP11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 COL18A1P39060 1754 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 OSBPL3Q9H4L5 887 aa11.25□□□□□ -0.61
LRTOMT-203ENST00000324866 HEG1Q9ULI3 1381 aa11.24□□□□□ -0.61
LRTOMT-203ENST00000324866 TUBGCP6Q96RT7 1819 aa11.24□□□□□ -0.61
LRTOMT-203ENST00000324866 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
LRTOMT-203ENST00000324866 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
LRTOMT-203ENST00000324866 RGPD5Q99666 1765 aa11.23□□□□□ -0.61
LRTOMT-203ENST00000324866 GSPT1P15170 499 aaKnown RBP11.23□□□□□ -0.61
LRTOMT-203ENST00000324866 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
LRTOMT-203ENST00000324866 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
LRTOMT-203ENST00000324866 IBTKQ9P2D0 1353 aaPredicted RBP11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 PXDNQ92626 1479 aa11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 F6X3S4 739 aa11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 RNMTO43148 476 aaKnown RBP11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
LRTOMT-203ENST00000324866 LGR6Q9HBX8 967 aa11.21□□□□□ -0.61
LRTOMT-203ENST00000324866 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
LRTOMT-203ENST00000324866 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
LRTOMT-203ENST00000324866 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.61
LRTOMT-203ENST00000324866 TMEM94Q12767 1356 aa11.21□□□□□ -0.62
LRTOMT-203ENST00000324866 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.62
LRTOMT-203ENST00000324866 KIF2CQ99661 725 aa11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 ERBB3P21860 1342 aa11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 TEFQ10587 303 aa11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 HSCBQ8IWL3 235 aa11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
LRTOMT-203ENST00000324866 ATF3P18847 181 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 XIRP1Q702N8 1843 aaKnown RBP11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 PKD1L3Q7Z443 1732 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 TNS3Q68CZ2 1445 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 AOX1Q06278 1338 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 DDIT3P35638 169 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 CHMP5Q9NZZ3 219 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
LRTOMT-203ENST00000324866 MRC1P22897 1456 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 SSH3Q8TE77 659 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 NPHP3Q7Z494 1330 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 CPDO75976 1380 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 FRAT2O75474 233 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 POLA2Q14181 598 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 STAP2Q9UGK3 403 aa11.18□□□□□ -0.62
LRTOMT-203ENST00000324866 SDSP20132 328 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 PDE1AP54750 535 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 PARP4Q9UKK3 1724 aaKnown RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 BEND3Q5T5X7 828 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 MPRIPQ6WCQ1 1025 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 DNAAF4Q8WXU2 420 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 LRRCC1Q9C099 1032 aa11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 DBF4Q9UBU7 674 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-203ENST00000324866 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 GSE1Q14687 1217 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 USP26Q9BXU7 913 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 PNMA6EA0A0J9YXQ4 647 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 ZBTB7CA1YPR0 619 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 KCNQ3O43525 872 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 CHPF2Q9P2E5 772 aa11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-203ENST00000324866 ADCY9O60503 1353 aa11.15□□□□□ -0.62
LRTOMT-203ENST00000324866 MTX1Q13505 466 aa11.15□□□□□ -0.62
LRTOMT-203ENST00000324866 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
LRTOMT-203ENST00000324866 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.62
LRTOMT-203ENST00000324866 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms