RNA–Protein interactions for RNA: ENST00000323699.8

DEGS1-201, Transcript of delta 4-desaturase, sphingolipid 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEGS1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS1-201ENST00000323699 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
DEGS1-201ENST00000323699 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
DEGS1-201ENST00000323699 IGSF1Q8N6C5 1336 aa19.03■□□□□ 0.64
DEGS1-201ENST00000323699 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
DEGS1-201ENST00000323699 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
DEGS1-201ENST00000323699 CAVIN1Q6NZI2 390 aaKnown RBP19.03■□□□□ 0.64
DEGS1-201ENST00000323699 ANP32BQ92688 251 aaKnown RBP19.03■□□□□ 0.64
DEGS1-201ENST00000323699 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
DEGS1-201ENST00000323699 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
DEGS1-201ENST00000323699 GNAI3P08754 354 aa19.01■□□□□ 0.63
DEGS1-201ENST00000323699 MCM2P49736 904 aa19.01■□□□□ 0.63
DEGS1-201ENST00000323699 ESYT1Q9BSJ8 1104 aa19.01■□□□□ 0.63
DEGS1-201ENST00000323699 LRRCC1Q9C099 1032 aa19.01■□□□□ 0.63
DEGS1-201ENST00000323699 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
DEGS1-201ENST00000323699 PTPRUQ92729 1446 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 SOX12O15370 315 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 ATP8B2P98198 1209 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 EYA1Q99502 592 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
DEGS1-201ENST00000323699 NCLP19338 710 aaKnown RBP19■□□□□ 0.63
DEGS1-201ENST00000323699 LTKP29376 864 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 FLIIQ13045 1269 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 CCDC30Q5VVM6 783 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 GPT2Q8TD30 523 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 IL17RAQ96F46 866 aa19■□□□□ 0.63
DEGS1-201ENST00000323699 MX1P20591 662 aa18.99■□□□□ 0.63
DEGS1-201ENST00000323699 NEK4P51957 841 aa18.99■□□□□ 0.63
DEGS1-201ENST00000323699 UBE2Q2Q8WVN8 375 aa18.99■□□□□ 0.63
DEGS1-201ENST00000323699 TMX3Q96JJ7 454 aa18.99■□□□□ 0.63
DEGS1-201ENST00000323699 STAP2Q9UGK3 403 aa18.99■□□□□ 0.63
DEGS1-201ENST00000323699 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
DEGS1-201ENST00000323699 ANAPC15P60006 121 aa18.98■□□□□ 0.63
DEGS1-201ENST00000323699 CUL4AQ13619 759 aa18.98■□□□□ 0.63
DEGS1-201ENST00000323699 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
DEGS1-201ENST00000323699 PNMA6EA0A0J9YXQ4 647 aa18.98■□□□□ 0.63
DEGS1-201ENST00000323699 PIK3C2AO00443 1686 aa18.98■□□□□ 0.63
DEGS1-201ENST00000323699 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
DEGS1-201ENST00000323699 CHMLP26374 656 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 SRCIN1Q9C0H9 1055 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 PXDNLA1KZ92 1463 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 MCCP23508 829 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 AMPHP49418 695 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 FKBP5Q13451 457 aaPredicted RBP18.97■□□□□ 0.63
DEGS1-201ENST00000323699 HS1BP3Q53T59 392 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 RBSNQ9H1K0 784 aa18.97■□□□□ 0.63
DEGS1-201ENST00000323699 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
DEGS1-201ENST00000323699 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
DEGS1-201ENST00000323699 INTS4Q96HW7 963 aaKnown RBP18.95■□□□□ 0.62
DEGS1-201ENST00000323699 AOX1Q06278 1338 aa18.95■□□□□ 0.62
DEGS1-201ENST00000323699 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
DEGS1-201ENST00000323699 BRD1O95696 1058 aa18.95■□□□□ 0.62
DEGS1-201ENST00000323699 PDLIM2Q96JY6 352 aa18.95■□□□□ 0.62
DEGS1-201ENST00000323699 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
DEGS1-201ENST00000323699 EPB41L2O43491 1005 aaKnown RBP18.94■□□□□ 0.62
DEGS1-201ENST00000323699 PALD1Q9ULE6 856 aa18.94■□□□□ 0.62
DEGS1-201ENST00000323699 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
DEGS1-201ENST00000323699 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
DEGS1-201ENST00000323699 LRSAM1Q6UWE0 723 aa18.93■□□□□ 0.62
DEGS1-201ENST00000323699 TMEM63CQ9P1W3 806 aa18.93■□□□□ 0.62
DEGS1-201ENST00000323699 RBM27Q9P2N5 1060 aaKnown RBP18.93■□□□□ 0.62
DEGS1-201ENST00000323699 MBD3O95983 291 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
DEGS1-201ENST00000323699 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
DEGS1-201ENST00000323699 MARF1Q9Y4F3 1742 aaKnown RBP18.92■□□□□ 0.62
DEGS1-201ENST00000323699 TRIM6-TRIM34B2RNG4 842 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 USP44Q9H0E7 712 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
DEGS1-201ENST00000323699 IL17REQ8NFR9 667 aa18.91■□□□□ 0.62
DEGS1-201ENST00000323699 MAP3K5Q99683 1374 aa18.91■□□□□ 0.62
DEGS1-201ENST00000323699 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
DEGS1-201ENST00000323699 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
DEGS1-201ENST00000323699 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
DEGS1-201ENST00000323699 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
DEGS1-201ENST00000323699 UNC5CLQ8IV45 518 aa18.9■□□□□ 0.62
DEGS1-201ENST00000323699 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
DEGS1-201ENST00000323699 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
DEGS1-201ENST00000323699 TPM2P07951 284 aa18.89■□□□□ 0.62
DEGS1-201ENST00000323699 HOXC9P31274 260 aa18.89■□□□□ 0.62
DEGS1-201ENST00000323699 EID1Q9Y6B2 187 aa18.89■□□□□ 0.62
DEGS1-201ENST00000323699 SLIT1O75093 1534 aa18.89■□□□□ 0.61
DEGS1-201ENST00000323699 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
DEGS1-201ENST00000323699 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
DEGS1-201ENST00000323699 ARHGAP23Q9P227 1491 aa18.88■□□□□ 0.61
DEGS1-201ENST00000323699 RRP9O43818 475 aaKnown RBP18.88■□□□□ 0.61
DEGS1-201ENST00000323699 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
DEGS1-201ENST00000323699 OFD1O75665 1012 aa18.88■□□□□ 0.61
DEGS1-201ENST00000323699 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
DEGS1-201ENST00000323699 KDM4FA0A1W2PPD8 638 aa18.88■□□□□ 0.61
DEGS1-201ENST00000323699 SYCE3A1L190 88 aa18.88■□□□□ 0.61
DEGS1-201ENST00000323699 HSPA4P34932 840 aa18.87■□□□□ 0.61
DEGS1-201ENST00000323699 NLRP6P59044 892 aa18.87■□□□□ 0.61
DEGS1-201ENST00000323699 FOXD4L5Q5VV16 416 aaPredicted RBP18.87■□□□□ 0.61
DEGS1-201ENST00000323699 FOXD4L4Q8WXT5 416 aaPredicted RBP18.87■□□□□ 0.61
DEGS1-201ENST00000323699 POLA2Q14181 598 aa18.86■□□□□ 0.61
DEGS1-201ENST00000323699 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
DEGS1-201ENST00000323699 ZNF500O60304 480 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms