RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 TAX1BP1Q86VP1 789 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 USP6NLQ92738 828 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 STK38Q15208 465 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 PDILTQ8N807 584 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-201ENST00000322507 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
COL12A1-201ENST00000322507 UBXN4Q92575 508 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 CCDC65Q8IXS2 484 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 CEP57L1Q8IYX8 460 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
COL12A1-201ENST00000322507 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-201ENST00000322507 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.6
COL12A1-201ENST00000322507 MAP3K1Q13233 1512 aa11.27□□□□□ -0.6
COL12A1-201ENST00000322507 CCDC160A6NGH7 325 aa11.27□□□□□ -0.6
COL12A1-201ENST00000322507 CCDC92Q53HC0 331 aaPredicted RBP11.27□□□□□ -0.6
COL12A1-201ENST00000322507 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.6
COL12A1-201ENST00000322507 ZFYVE27Q5T4F4 411 aa11.27□□□□□ -0.6
COL12A1-201ENST00000322507 PPP6R1Q9UPN7 881 aa11.27□□□□□ -0.6
COL12A1-201ENST00000322507 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
COL12A1-201ENST00000322507 RAD21O60216 631 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 POGZQ7Z3K3 1410 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-201ENST00000322507 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
COL12A1-201ENST00000322507 NAA25Q14CX7 972 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-201ENST00000322507 PLIN1O60240 522 aa11.27□□□□□ -0.61
COL12A1-201ENST00000322507 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-201ENST00000322507 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-201ENST00000322507 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 CETN2P41208 172 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 DDX12PQ92771 950 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-201ENST00000322507 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 NCAPD3P42695 1498 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 CCDC148Q8NFR7 591 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
COL12A1-201ENST00000322507 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
COL12A1-201ENST00000322507 MACROD2A1Z1Q3 448 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
COL12A1-201ENST00000322507 NEK4P51957 841 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 K7ELQ4 463 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-201ENST00000322507 CBX1P83916 185 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 PTPN23Q9H3S7 1636 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 SERPINC1P01008 464 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 MAP7Q14244 749 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 KRT18P05783 430 aaKnown RBP11.25□□□□□ -0.61
COL12A1-201ENST00000322507 PRIMPOLQ96LW4 560 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 CTAGE5O15320 804 aa11.25□□□□□ -0.61
COL12A1-201ENST00000322507 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 NEMFO60524 1076 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 VPS36Q86VN1 386 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 MCM6Q14566 821 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 SPATS2LQ9NUQ6 558 aaKnown RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 GBP7Q8N8V2 638 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-201ENST00000322507 MAP2K2P36507 400 aa11.24□□□□□ -0.61
COL12A1-201ENST00000322507 TUBB4BP68371 445 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 IQGAP2Q13576 1575 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 EIF2AK4Q9P2K8 1649 aaKnown RBP11.23□□□□□ -0.61
COL12A1-201ENST00000322507 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
COL12A1-201ENST00000322507 CCDC69A6NI79 296 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 KIF18AQ8NI77 898 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 SEPT8Q92599 483 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 RAB34Q9BZG1 259 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 MKL2Q9ULH7 1088 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 IGF1RP08069 1367 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 VCXQ9H320 206 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 ERBINQ96RT1 1412 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 BLVRAP53004 296 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 FBF1Q8TES7 1133 aa11.23□□□□□ -0.61
COL12A1-201ENST00000322507 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
COL12A1-201ENST00000322507 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL12A1-201ENST00000322507 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms