RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 TMEM63CQ9P1W3 806 aa21.81■■□□□ 1.08
CRTC1-201ENST00000321949 TBX22Q9Y458 520 aa21.81■■□□□ 1.08
CRTC1-201ENST00000321949 CRB1P82279 1406 aa21.81■■□□□ 1.08
CRTC1-201ENST00000321949 PTPRUQ92729 1446 aa21.81■■□□□ 1.08
CRTC1-201ENST00000321949 MTHFSDQ2M296 383 aaKnown RBP21.81■■□□□ 1.08
CRTC1-201ENST00000321949 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
CRTC1-201ENST00000321949 SYCE3A1L190 88 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 SLC26A8Q96RN1 970 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 PALD1Q9ULE6 856 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 ITSN1Q15811 1721 aa21.8■■□□□ 1.08
CRTC1-201ENST00000321949 RRP9O43818 475 aaKnown RBP21.79■■□□□ 1.08
CRTC1-201ENST00000321949 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
CRTC1-201ENST00000321949 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
CRTC1-201ENST00000321949 RILPL2Q969X0 211 aa21.78■■□□□ 1.08
CRTC1-201ENST00000321949 GNAI2P04899 355 aa21.78■■□□□ 1.08
CRTC1-201ENST00000321949 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
CRTC1-201ENST00000321949 PNMA6EA0A0J9YXQ4 647 aa21.77■■□□□ 1.08
CRTC1-201ENST00000321949 TRIM6-TRIM34B2RNG4 842 aa21.77■■□□□ 1.08
CRTC1-201ENST00000321949 FOXD4L6Q3SYB3 417 aaPredicted RBP21.77■■□□□ 1.08
CRTC1-201ENST00000321949 FOXD4L3Q6VB84 417 aaPredicted RBP21.77■■□□□ 1.08
CRTC1-201ENST00000321949 ESYT1Q9BSJ8 1104 aa21.77■■□□□ 1.08
CRTC1-201ENST00000321949 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.08
CRTC1-201ENST00000321949 ANO2Q9NQ90 1003 aa21.77■■□□□ 1.08
CRTC1-201ENST00000321949 CEP170BQ9Y4F5 1589 aaPredicted RBP21.77■■□□□ 1.08
CRTC1-201ENST00000321949 RIMS1Q86UR5 1692 aaKnown RBP21.76■■□□□ 1.07
CRTC1-201ENST00000321949 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
CRTC1-201ENST00000321949 LRRCC1Q9C099 1032 aa21.76■■□□□ 1.07
CRTC1-201ENST00000321949 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
CRTC1-201ENST00000321949 OFD1O75665 1012 aa21.75■■□□□ 1.07
CRTC1-201ENST00000321949 MX1P20591 662 aa21.75■■□□□ 1.07
CRTC1-201ENST00000321949 RNF214Q8ND24 703 aa21.75■■□□□ 1.07
CRTC1-201ENST00000321949 FKBP5Q13451 457 aaPredicted RBP21.74■■□□□ 1.07
CRTC1-201ENST00000321949 PDLIM2Q96JY6 352 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 UPF3BQ9BZI7 483 aaKnown RBP21.74■■□□□ 1.07
CRTC1-201ENST00000321949 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 SALL3Q9BXA9 1300 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 LRSAM1Q6UWE0 723 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.74■■□□□ 1.07
CRTC1-201ENST00000321949 PEAK1Q9H792 1746 aa21.74■■□□□ 1.07
CRTC1-201ENST00000321949 TPM2P07951 284 aa21.73■■□□□ 1.07
CRTC1-201ENST00000321949 UNC5CLQ8IV45 518 aa21.73■■□□□ 1.07
CRTC1-201ENST00000321949 STK31Q9BXU1 1019 aa21.73■■□□□ 1.07
CRTC1-201ENST00000321949 CHMLP26374 656 aa21.72■■□□□ 1.07
CRTC1-201ENST00000321949 XPCQ01831 940 aaPredicted RBP21.72■■□□□ 1.07
CRTC1-201ENST00000321949 FLIIQ13045 1269 aa21.72■■□□□ 1.07
CRTC1-201ENST00000321949 NOL7Q9UMY1 257 aaKnown RBP21.72■■□□□ 1.07
CRTC1-201ENST00000321949 BRD1O95696 1058 aa21.71■■□□□ 1.07
CRTC1-201ENST00000321949 XRN1Q8IZH2 1706 aaKnown RBP21.71■■□□□ 1.07
CRTC1-201ENST00000321949 GLIPR1L2Q4G1C9 344 aa21.71■■□□□ 1.07
CRTC1-201ENST00000321949 IL25Q9H293 177 aa21.71■■□□□ 1.07
CRTC1-201ENST00000321949 GDPD2Q9HCC8 539 aa21.71■■□□□ 1.07
CRTC1-201ENST00000321949 PLEKHG3A1L390 1219 aa21.7■■□□□ 1.06
CRTC1-201ENST00000321949 LRRFIP2Q9Y608 721 aaKnown RBP21.7■■□□□ 1.06
CRTC1-201ENST00000321949 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
CRTC1-201ENST00000321949 USP6P35125 1406 aa21.7■■□□□ 1.06
CRTC1-201ENST00000321949 MCCP23508 829 aa21.69■■□□□ 1.06
CRTC1-201ENST00000321949 EYA1Q99502 592 aa21.69■■□□□ 1.06
CRTC1-201ENST00000321949 R3HCC1Q9Y3T6 440 aaKnown RBP21.69■■□□□ 1.06
CRTC1-201ENST00000321949 CUL4AQ13619 759 aa21.69■■□□□ 1.06
CRTC1-201ENST00000321949 HS1BP3Q53T59 392 aa21.69■■□□□ 1.06
CRTC1-201ENST00000321949 ADAMTSL3P82987 1691 aa21.69■■□□□ 1.06
CRTC1-201ENST00000321949 MCM2P49736 904 aa21.68■■□□□ 1.06
CRTC1-201ENST00000321949 ATP8B2P98198 1209 aa21.68■■□□□ 1.06
CRTC1-201ENST00000321949 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.68■■□□□ 1.06
CRTC1-201ENST00000321949 MAP4K4O95819 1239 aaPredicted RBP21.68■■□□□ 1.06
CRTC1-201ENST00000321949 VSIG10Q8N0Z9 540 aa21.68■■□□□ 1.06
CRTC1-201ENST00000321949 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
CRTC1-201ENST00000321949 GNAI3P08754 354 aa21.67■■□□□ 1.06
CRTC1-201ENST00000321949 MBD3O95983 291 aa21.67■■□□□ 1.06
CRTC1-201ENST00000321949 AMPHP49418 695 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 TPRNQ4KMQ1 711 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 NUTM1Q86Y26 1132 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 RGPD1P0DJD0 1748 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 ARHGEF10O15013 1369 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 USP31Q70CQ4 1352 aa21.66■■□□□ 1.06
CRTC1-201ENST00000321949 GADD45BO75293 160 aaPredicted RBP21.65■■□□□ 1.06
CRTC1-201ENST00000321949 RBM10P98175 930 aaKnown RBP21.65■■□□□ 1.06
CRTC1-201ENST00000321949 CCDC30Q5VVM6 783 aa21.65■■□□□ 1.06
CRTC1-201ENST00000321949 ZKSCAN5Q9Y2L8 839 aa21.65■■□□□ 1.06
CRTC1-201ENST00000321949 ANAPC15P60006 121 aa21.64■■□□□ 1.06
CRTC1-201ENST00000321949 ZNF500O60304 480 aaPredicted RBP21.64■■□□□ 1.05
CRTC1-201ENST00000321949 USP44Q9H0E7 712 aa21.64■■□□□ 1.05
CRTC1-201ENST00000321949 INTS4Q96HW7 963 aaKnown RBP21.63■■□□□ 1.05
CRTC1-201ENST00000321949 LARP6Q9BRS8 491 aaKnown RBP21.63■■□□□ 1.05
CRTC1-201ENST00000321949 STAP2Q9UGK3 403 aa21.63■■□□□ 1.05
CRTC1-201ENST00000321949 FLT4P35916 1363 aa21.62■■□□□ 1.05
CRTC1-201ENST00000321949 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
CRTC1-201ENST00000321949 KDRP35968 1356 aa21.61■■□□□ 1.05
CRTC1-201ENST00000321949 UBTFL1P0CB47 393 aaPredicted RBP21.61■■□□□ 1.05
CRTC1-201ENST00000321949 USP48Q86UV5 1035 aa21.61■■□□□ 1.05
CRTC1-201ENST00000321949 MPNDQ8N594 471 aa21.61■■□□□ 1.05
CRTC1-201ENST00000321949 TSPY26PQ9H489 355 aa21.61■■□□□ 1.05
CRTC1-201ENST00000321949 IGSF1Q8N6C5 1336 aa21.6■■□□□ 1.05
CRTC1-201ENST00000321949 ANKLE2Q86XL3 938 aa21.6■■□□□ 1.05
CRTC1-201ENST00000321949 NGDNQ8NEJ9 315 aaKnown RBP21.6■■□□□ 1.05
CRTC1-201ENST00000321949 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
CRTC1-201ENST00000321949 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms