RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 ARAP3Q8WWN8 1544 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 ABCA6Q8N139 1617 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 APBB1O00213 710 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 ELF2Q15723 593 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 ZSCAN25Q6NSZ9 544 aa9.52□□□□□ -0.89
RTL3-201ENST00000321110 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
RTL3-201ENST00000321110 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 FIBPO43427 364 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 NOL10Q9BSC4 688 aaKnown RBP9.51□□□□□ -0.89
RTL3-201ENST00000321110 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
RTL3-201ENST00000321110 MAP3K4Q9Y6R4 1608 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
RTL3-201ENST00000321110 TPD52L1Q16890 204 aaPredicted RBP9.51□□□□□ -0.89
RTL3-201ENST00000321110 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
RTL3-201ENST00000321110 SECISBP2LQ93073 1101 aaKnown RBP9.51□□□□□ -0.89
RTL3-201ENST00000321110 RGS12O14924 1447 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 MYO3AQ8NEV4 1616 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 LUZP1Q86V48 1076 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 ASXL2Q76L83 1435 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 ZSCAN22P10073 491 aaPredicted RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 CACTINQ8WUQ7 758 aaKnown RBP9.5□□□□□ -0.89
RTL3-201ENST00000321110 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
RTL3-201ENST00000321110 ATP7AQ04656 1500 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 TCHHQ07283 1943 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 KIF1BO60333 1816 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 USP27XA6NNY8 438 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 BRD2P25440 801 aaKnown RBP9.49□□□□□ -0.89
RTL3-201ENST00000321110 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 FAM200AQ8TCP9 573 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 CHMP4CQ96CF2 233 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 CCDC192P0DO97 292 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 THUMPD2Q9BTF0 503 aaKnown RBP9.49□□□□□ -0.89
RTL3-201ENST00000321110 RSPH14Q9UHP6 348 aa9.49□□□□□ -0.89
RTL3-201ENST00000321110 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 DRC7Q8IY82 874 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 FHOD1Q9Y613 1164 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 PLA2G4DQ86XP0 818 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 NEK11Q8NG66 645 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 ERO1AQ96HE7 468 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
RTL3-201ENST00000321110 ABCA9Q8IUA7 1624 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 UGGT1Q9NYU2 1555 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 NSD2O96028 1365 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 NOP2P46087 812 aaKnown RBP9.47□□□□□ -0.89
RTL3-201ENST00000321110 ZNF75DP51815 510 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 ANAPC15P60006 121 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 NYAP1Q6ZVC0 841 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 MROH1Q8NDA8 1641 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 MROH2AA6NES4 1674 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 NPHP1O15259 732 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 F13A1P00488 732 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 H2AFXP16104 143 aaPredicted RBP9.47□□□□□ -0.89
RTL3-201ENST00000321110 SYT1P21579 422 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 DNM1Q05193 864 aaKnown RBP9.47□□□□□ -0.89
RTL3-201ENST00000321110 TSHZ3Q63HK5 1081 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
RTL3-201ENST00000321110 PTPRCP08575 1304 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 ARHGEF40Q8TER5 1519 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 SOX12O15370 315 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 STX6O43752 255 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 PDE1AP54750 535 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 TYRO3Q06418 890 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 BMS1Q14692 1282 aaKnown RBP9.46□□□□□ -0.89
RTL3-201ENST00000321110 ARID5BQ14865 1188 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 KRT24Q2M2I5 525 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 SYT10Q6XYQ8 523 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 API5Q9BZZ5 524 aaKnown RBP9.46□□□□□ -0.89
RTL3-201ENST00000321110 YY1AP1Q9H869 796 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.89
RTL3-201ENST00000321110 DTNBO60941 627 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 MCCP23508 829 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 TNNT3P45378 269 aaPredicted RBP9.46□□□□□ -0.9
RTL3-201ENST00000321110 MLECQ14165 292 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 TRIM5Q9C035 493 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 RASSF4Q9H2L5 321 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 TMX1Q9H3N1 280 aa9.46□□□□□ -0.9
RTL3-201ENST00000321110 TRIM66O15016 1216 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 SLU7O95391 586 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms