RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 LETM1O95202 739 aaPredicted RBP19.68■□□□□ 0.74
ITGA3-202ENST00000320031 VPS53Q5VIR6 699 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 NACAP1Q9BZK3 213 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 AKAP2Q9Y2D5 859 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 PCDHB15Q9Y5E8 787 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
ITGA3-202ENST00000320031 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 SLC3A2P08195 630 aaKnown RBP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 HSP90AB3PQ58FF7 597 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 TEX13AQ9BXU3 409 aaPredicted RBP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 BRMS1Q9HCU9 246 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
ITGA3-202ENST00000320031 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
ITGA3-202ENST00000320031 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 MAP3K2Q9Y2U5 619 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
ITGA3-202ENST00000320031 CCDC47Q96A33 483 aaKnown RBP19.66■□□□□ 0.74
ITGA3-202ENST00000320031 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 PDRG1Q9NUG6 133 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 VAMP4O75379 141 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 TPM3P06753 285 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 UBE2Q2Q8WVN8 375 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
ITGA3-202ENST00000320031 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
ITGA3-202ENST00000320031 SNRPA1P09661 255 aaKnown RBP19.65■□□□□ 0.74
ITGA3-202ENST00000320031 NUCB1Q02818 461 aa19.65■□□□□ 0.74
ITGA3-202ENST00000320031 MAP3K19Q56UN5 1328 aa19.65■□□□□ 0.74
ITGA3-202ENST00000320031 NCKAP5LQ9HCH0 1330 aa19.65■□□□□ 0.74
ITGA3-202ENST00000320031 CAVIN1Q6NZI2 390 aaKnown RBP19.65■□□□□ 0.74
ITGA3-202ENST00000320031 FAM13BQ9NYF5 915 aa19.65■□□□□ 0.74
ITGA3-202ENST00000320031 MYOM2P54296 1465 aa19.65■□□□□ 0.74
ITGA3-202ENST00000320031 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
ITGA3-202ENST00000320031 ZNF652Q9Y2D9 606 aa19.64■□□□□ 0.74
ITGA3-202ENST00000320031 CHRNA2Q15822 529 aa19.64■□□□□ 0.73
ITGA3-202ENST00000320031 TPM1P09493 284 aa19.64■□□□□ 0.73
ITGA3-202ENST00000320031 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.64■□□□□ 0.73
ITGA3-202ENST00000320031 EYA1Q99502 592 aa19.64■□□□□ 0.73
ITGA3-202ENST00000320031 BLMP54132 1417 aaPredicted RBP19.64■□□□□ 0.73
ITGA3-202ENST00000320031 A0A087WZG4 1122 aa19.64■□□□□ 0.73
ITGA3-202ENST00000320031 EXOC5O00471 708 aa19.64■□□□□ 0.73
ITGA3-202ENST00000320031 MAGI2Q86UL8 1455 aa19.63■□□□□ 0.73
ITGA3-202ENST00000320031 RAD21O60216 631 aa19.63■□□□□ 0.73
ITGA3-202ENST00000320031 IGHMBP2P38935 993 aaKnown RBP19.63■□□□□ 0.73
ITGA3-202ENST00000320031 ZNF396Q96N95 335 aaPredicted RBP19.63■□□□□ 0.73
ITGA3-202ENST00000320031 NASPP49321 788 aaPredicted RBP19.63■□□□□ 0.73
ITGA3-202ENST00000320031 KDM5AP29375 1690 aaKnown RBP19.63■□□□□ 0.73
ITGA3-202ENST00000320031 KDM5CP41229 1560 aa19.63■□□□□ 0.73
ITGA3-202ENST00000320031 ANKRD44Q8N8A2 993 aa19.63■□□□□ 0.73
ITGA3-202ENST00000320031 SOS1Q07889 1333 aaPredicted RBP19.63■□□□□ 0.73
ITGA3-202ENST00000320031 TPM2P07951 284 aa19.62■□□□□ 0.73
ITGA3-202ENST00000320031 MCM4P33991 863 aa19.62■□□□□ 0.73
ITGA3-202ENST00000320031 IL13P35225 146 aa19.62■□□□□ 0.73
ITGA3-202ENST00000320031 METTL24Q5JXM2 366 aa19.62■□□□□ 0.73
ITGA3-202ENST00000320031 PPP1R42Q7Z4L9 355 aa19.62■□□□□ 0.73
ITGA3-202ENST00000320031 TSR1Q2NL82 804 aaKnown RBP19.62■□□□□ 0.73
ITGA3-202ENST00000320031 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 FIBPO43427 364 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 HOXC9P31274 260 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 ANKRD20A12PQ8NF67 263 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 MEIS3Q99687 375 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 IP6K1Q92551 441 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 SDF4Q9BRK5 362 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 PES1O00541 588 aaKnown RBP19.61■□□□□ 0.73
ITGA3-202ENST00000320031 GCP02774 474 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
ITGA3-202ENST00000320031 CFAP65Q6ZU64 1925 aaKnown RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 RRP12Q5JTH9 1297 aaKnown RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 TTC22Q5TAA0 569 aa19.6■□□□□ 0.73
ITGA3-202ENST00000320031 TBC1D9Q6ZT07 1266 aa19.6■□□□□ 0.73
ITGA3-202ENST00000320031 IFIT5Q13325 482 aaKnown RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 LARP1BQ659C4 914 aaKnown RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 BOLA2Q9H3K6 86 aa19.6■□□□□ 0.73
ITGA3-202ENST00000320031 CDC42BPAQ5VT25 1732 aa19.6■□□□□ 0.73
ITGA3-202ENST00000320031 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 NAT10Q9H0A0 1025 aaKnown RBP19.6■□□□□ 0.73
ITGA3-202ENST00000320031 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
ITGA3-202ENST00000320031 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
ITGA3-202ENST00000320031 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
ITGA3-202ENST00000320031 PLEKHG3A1L390 1219 aa19.59■□□□□ 0.73
ITGA3-202ENST00000320031 KRT85P78386 507 aa19.59■□□□□ 0.73
ITGA3-202ENST00000320031 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
ITGA3-202ENST00000320031 KINO60870 393 aaKnown RBP19.58■□□□□ 0.73
ITGA3-202ENST00000320031 RLBP1P12271 317 aa19.58■□□□□ 0.73
ITGA3-202ENST00000320031 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.73
ITGA3-202ENST00000320031 STK3Q13188 491 aa19.58■□□□□ 0.73
ITGA3-202ENST00000320031 ADAMTS2O95450 1211 aa19.58■□□□□ 0.73
ITGA3-202ENST00000320031 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.73
ITGA3-202ENST00000320031 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.73
ITGA3-202ENST00000320031 RRP9O43818 475 aaKnown RBP19.58■□□□□ 0.72
ITGA3-202ENST00000320031 ANKRD13DQ6ZTN6 518 aa19.58■□□□□ 0.72
ITGA3-202ENST00000320031 HECW2Q9P2P5 1572 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms