RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CD2BP2O95400 341 aaKnown RBP19.14■□□□□ 0.66
SHROOM1-201ENST00000319854 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
SHROOM1-201ENST00000319854 FLIIQ13045 1269 aa19.14■□□□□ 0.65
SHROOM1-201ENST00000319854 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-201ENST00000319854 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
SHROOM1-201ENST00000319854 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
SHROOM1-201ENST00000319854 RGS12O14924 1447 aa19.13■□□□□ 0.65
SHROOM1-201ENST00000319854 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
SHROOM1-201ENST00000319854 PHAXQ9H814 394 aaKnown RBP19.13■□□□□ 0.65
SHROOM1-201ENST00000319854 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
SHROOM1-201ENST00000319854 PTPRCP08575 1304 aa19.12■□□□□ 0.65
SHROOM1-201ENST00000319854 KCNQ3O43525 872 aa19.12■□□□□ 0.65
SHROOM1-201ENST00000319854 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
SHROOM1-201ENST00000319854 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
SHROOM1-201ENST00000319854 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
SHROOM1-201ENST00000319854 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 SNX21Q969T3 373 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 CDC45O75419 566 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 KIF2CQ99661 725 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 KDRP35968 1356 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 PIK3C2AO00443 1686 aa19.1■□□□□ 0.65
SHROOM1-201ENST00000319854 GBP4Q96PP9 640 aa19.09■□□□□ 0.65
SHROOM1-201ENST00000319854 NASPP49321 788 aaPredicted RBP19.09■□□□□ 0.65
SHROOM1-201ENST00000319854 ZC3H6P61129 1189 aaKnown RBP19.09■□□□□ 0.65
SHROOM1-201ENST00000319854 OFD1O75665 1012 aa19.09■□□□□ 0.65
SHROOM1-201ENST00000319854 ZSCAN30Q86W11 494 aa19.09■□□□□ 0.65
SHROOM1-201ENST00000319854 SSFA2P28290 1259 aa19.08■□□□□ 0.65
SHROOM1-201ENST00000319854 TTC22Q5TAA0 569 aa19.08■□□□□ 0.65
SHROOM1-201ENST00000319854 ATP10DQ9P241 1426 aa19.08■□□□□ 0.65
SHROOM1-201ENST00000319854 PNMA6EA0A0J9YXQ4 647 aa19.08■□□□□ 0.64
SHROOM1-201ENST00000319854 SDSP20132 328 aa19.08■□□□□ 0.64
SHROOM1-201ENST00000319854 CCDC173Q0VFZ6 552 aa19.08■□□□□ 0.64
SHROOM1-201ENST00000319854 ZNF530Q6P9A1 599 aaPredicted RBP19.08■□□□□ 0.64
SHROOM1-201ENST00000319854 MAP3K5Q99683 1374 aa19.08■□□□□ 0.64
SHROOM1-201ENST00000319854 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
SHROOM1-201ENST00000319854 GNAI2P04899 355 aa19.07■□□□□ 0.64
SHROOM1-201ENST00000319854 CCT4P50991 539 aaKnown RBP19.07■□□□□ 0.64
SHROOM1-201ENST00000319854 SKOR2Q2VWA4 1001 aaPredicted RBP19.07■□□□□ 0.64
SHROOM1-201ENST00000319854 PRDM4Q9UKN5 801 aa19.07■□□□□ 0.64
SHROOM1-201ENST00000319854 TEFQ10587 303 aa19.06■□□□□ 0.64
SHROOM1-201ENST00000319854 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
SHROOM1-201ENST00000319854 HMMRO75330 724 aa19.06■□□□□ 0.64
SHROOM1-201ENST00000319854 IP6K1Q92551 441 aa19.06■□□□□ 0.64
SHROOM1-201ENST00000319854 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
SHROOM1-201ENST00000319854 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-201ENST00000319854 GCP02774 474 aa19.05■□□□□ 0.64
SHROOM1-201ENST00000319854 AK9Q5TCS8 1911 aa19.04■□□□□ 0.64
SHROOM1-201ENST00000319854 FAM13BQ9NYF5 915 aa19.04■□□□□ 0.64
SHROOM1-201ENST00000319854 R3HCC1Q9Y3T6 440 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-201ENST00000319854 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
SHROOM1-201ENST00000319854 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
SHROOM1-201ENST00000319854 RILPL2Q969X0 211 aa19.03■□□□□ 0.64
SHROOM1-201ENST00000319854 TRIM6-TRIM34B2RNG4 842 aa19.03■□□□□ 0.64
SHROOM1-201ENST00000319854 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 BTBD11A6QL63 1104 aa19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 MAP4K4O95819 1239 aaPredicted RBP19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 DDX49Q9Y6V7 483 aaKnown RBP19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 ANKARQ7Z5J8 1434 aa19.02■□□□□ 0.64
SHROOM1-201ENST00000319854 RGPD1P0DJD0 1748 aa19.02■□□□□ 0.63
SHROOM1-201ENST00000319854 MSNP26038 577 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-201ENST00000319854 UBTFL1P0CB47 393 aaPredicted RBP19.01■□□□□ 0.63
SHROOM1-201ENST00000319854 CABLES1Q8TDN4 633 aa19.01■□□□□ 0.63
SHROOM1-201ENST00000319854 ARID3AQ99856 593 aa19.01■□□□□ 0.63
SHROOM1-201ENST00000319854 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-201ENST00000319854 ANKRD24Q8TF21 1146 aa19■□□□□ 0.63
SHROOM1-201ENST00000319854 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
SHROOM1-201ENST00000319854 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
SHROOM1-201ENST00000319854 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
SHROOM1-201ENST00000319854 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
SHROOM1-201ENST00000319854 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 NUTM1Q86Y26 1132 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 USP44Q9H0E7 712 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 HTATSF1O43719 755 aaKnown RBP18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 BAG4O95429 457 aaKnown RBP18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 PDE1AP54750 535 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 K7ELQ4 463 aaPredicted RBP18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.99■□□□□ 0.63
SHROOM1-201ENST00000319854 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 GNAI3P08754 354 aa18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 NBPF7P0C2Y1 421 aaPredicted RBP18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
SHROOM1-201ENST00000319854 NLRP2Q9NX02 1062 aa18.97■□□□□ 0.63
SHROOM1-201ENST00000319854 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-201ENST00000319854 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
SHROOM1-201ENST00000319854 RBSNQ9H1K0 784 aa18.97■□□□□ 0.63
SHROOM1-201ENST00000319854 SLC39A6Q13433 755 aa18.96■□□□□ 0.63
SHROOM1-201ENST00000319854 PROSER3Q2NL68 480 aa18.96■□□□□ 0.63
SHROOM1-201ENST00000319854 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.63
SHROOM1-201ENST00000319854 ANP32BQ92688 251 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms