RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 PLEKHG5O94827 1062 aa25.57■■□□□ 1.68
TTC39C-202ENST00000317571 SDSP20132 328 aa25.57■■□□□ 1.68
TTC39C-202ENST00000317571 SLIT3O75094 1523 aa25.57■■□□□ 1.68
TTC39C-202ENST00000317571 LMO7Q8WWI1 1683 aa25.57■■□□□ 1.68
TTC39C-202ENST00000317571 GNAI2P04899 355 aa25.56■■□□□ 1.68
TTC39C-202ENST00000317571 PHAXQ9H814 394 aaKnown RBP25.56■■□□□ 1.68
TTC39C-202ENST00000317571 CHMP5Q9NZZ3 219 aa25.56■■□□□ 1.68
TTC39C-202ENST00000317571 PNMA6EA0A0J9YXQ4 647 aa25.56■■□□□ 1.68
TTC39C-202ENST00000317571 PRKCSHP14314 528 aaPredicted RBP25.56■■□□□ 1.68
TTC39C-202ENST00000317571 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
TTC39C-202ENST00000317571 RTN4Q9NQC3 1192 aaKnown RBP25.56■■□□□ 1.68
TTC39C-202ENST00000317571 PXDNQ92626 1479 aa25.56■■□□□ 1.68
TTC39C-202ENST00000317571 KCNQ3O43525 872 aa25.55■■□□□ 1.68
TTC39C-202ENST00000317571 BRPF3Q9ULD4 1205 aa25.55■■□□□ 1.68
TTC39C-202ENST00000317571 EXOC6BQ9Y2D4 811 aa25.55■■□□□ 1.68
TTC39C-202ENST00000317571 TRPM3Q9HCF6 1732 aaPredicted RBP25.55■■□□□ 1.68
TTC39C-202ENST00000317571 SOS1Q07889 1333 aaPredicted RBP25.54■■□□□ 1.68
TTC39C-202ENST00000317571 HMMRO75330 724 aa25.54■■□□□ 1.68
TTC39C-202ENST00000317571 GCP02774 474 aa25.54■■□□□ 1.68
TTC39C-202ENST00000317571 HDGFL1Q5TGJ6 251 aa25.54■■□□□ 1.68
TTC39C-202ENST00000317571 ARHGEF25Q86VW2 580 aa25.53■■□□□ 1.68
TTC39C-202ENST00000317571 PXDNLA1KZ92 1463 aa25.53■■□□□ 1.68
TTC39C-202ENST00000317571 EIF4A1P60842 406 aaKnown RBP25.53■■□□□ 1.68
TTC39C-202ENST00000317571 NCAPD2Q15021 1401 aa25.53■■□□□ 1.68
TTC39C-202ENST00000317571 TUBGCP6Q96RT7 1819 aa25.53■■□□□ 1.68
TTC39C-202ENST00000317571 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
TTC39C-202ENST00000317571 SALL3Q9BXA9 1300 aa25.51■■□□□ 1.67
TTC39C-202ENST00000317571 MCM4P33991 863 aa25.51■■□□□ 1.67
TTC39C-202ENST00000317571 LRRFIP2Q9Y608 721 aaKnown RBP25.51■■□□□ 1.67
TTC39C-202ENST00000317571 USP26Q9BXU7 913 aa25.5■■□□□ 1.67
TTC39C-202ENST00000317571 GNAI3P08754 354 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 PDE1AP54750 535 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 TSHZ3Q63HK5 1081 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 AXIN2Q9Y2T1 843 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 ATP8B2P98198 1209 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 ZNF530Q6P9A1 599 aaPredicted RBP25.49■■□□□ 1.67
TTC39C-202ENST00000317571 MPRIPQ6WCQ1 1025 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 OSBPL3Q9H4L5 887 aa25.49■■□□□ 1.67
TTC39C-202ENST00000317571 EIF2S2P20042 333 aaKnown RBP25.48■■□□□ 1.67
TTC39C-202ENST00000317571 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
TTC39C-202ENST00000317571 RGPD5Q99666 1765 aa25.47■■□□□ 1.67
TTC39C-202ENST00000317571 HSP90AB1P08238 724 aaKnown RBP25.47■■□□□ 1.67
TTC39C-202ENST00000317571 AKAP4Q5JQC9 854 aa25.47■■□□□ 1.67
TTC39C-202ENST00000317571 IBTKQ9P2D0 1353 aaPredicted RBP25.46■■□□□ 1.67
TTC39C-202ENST00000317571 LMOD2Q6P5Q4 547 aa25.46■■□□□ 1.67
TTC39C-202ENST00000317571 CHPF2Q9P2E5 772 aa25.46■■□□□ 1.67
TTC39C-202ENST00000317571 K7ELQ4 463 aaPredicted RBP25.46■■□□□ 1.67
TTC39C-202ENST00000317571 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
TTC39C-202ENST00000317571 ANXA1P04083 346 aa25.45■■□□□ 1.67
TTC39C-202ENST00000317571 ANKRD24Q8TF21 1146 aa25.45■■□□□ 1.67
TTC39C-202ENST00000317571 FOXD4L1Q9NU39 408 aa25.45■■□□□ 1.67
TTC39C-202ENST00000317571 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
TTC39C-202ENST00000317571 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
TTC39C-202ENST00000317571 LRRCC1Q9C099 1032 aa25.43■■□□□ 1.66
TTC39C-202ENST00000317571 PLEKHO1Q53GL0 409 aaPredicted RBP25.43■■□□□ 1.66
TTC39C-202ENST00000317571 BTBD11A6QL63 1104 aa25.42■■□□□ 1.66
TTC39C-202ENST00000317571 RNMTO43148 476 aaKnown RBP25.42■■□□□ 1.66
TTC39C-202ENST00000317571 UBTFL1P0CB47 393 aaPredicted RBP25.41■■□□□ 1.66
TTC39C-202ENST00000317571 TEFQ10587 303 aa25.41■■□□□ 1.66
TTC39C-202ENST00000317571 ALS2Q96Q42 1657 aa25.41■■□□□ 1.66
TTC39C-202ENST00000317571 HOXB7P09629 217 aa25.41■■□□□ 1.66
TTC39C-202ENST00000317571 KIF1AQ12756 1690 aa25.4■■□□□ 1.66
TTC39C-202ENST00000317571 TNPO1Q92973 898 aaKnown RBP25.4■■□□□ 1.66
TTC39C-202ENST00000317571 SIPA1L3O60292 1781 aaPredicted RBP25.4■■□□□ 1.66
TTC39C-202ENST00000317571 ADCY9O60503 1353 aa25.4■■□□□ 1.66
TTC39C-202ENST00000317571 NBPF7P0C2Y1 421 aaPredicted RBP25.39■■□□□ 1.66
TTC39C-202ENST00000317571 AMOTQ4VCS5 1084 aa25.39■■□□□ 1.66
TTC39C-202ENST00000317571 BEND3Q5T5X7 828 aa25.39■■□□□ 1.66
TTC39C-202ENST00000317571 SSH3Q8TE77 659 aa25.39■■□□□ 1.66
TTC39C-202ENST00000317571 SRCIN1Q9C0H9 1055 aa25.39■■□□□ 1.66
TTC39C-202ENST00000317571 PRAMEF22A3QJZ6 481 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 PI4KAP2A4QPH2 592 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 MX1P20591 662 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 RAB3GAP1Q15042 981 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 RABEP1Q15276 862 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 PI4KAP1Q8N8J0 262 aa25.38■■□□□ 1.65
TTC39C-202ENST00000317571 CIZ1Q9ULV3 898 aaPredicted RBP25.38■■□□□ 1.65
TTC39C-202ENST00000317571 PROSER3Q2NL68 480 aa25.37■■□□□ 1.65
TTC39C-202ENST00000317571 DDX17Q92841 729 aaKnown RBP25.37■■□□□ 1.65
TTC39C-202ENST00000317571 STRCP1A6NGW2 1772 aa25.37■■□□□ 1.65
TTC39C-202ENST00000317571 ADAMTS7Q9UKP4 1686 aa25.37■■□□□ 1.65
TTC39C-202ENST00000317571 PPP1R42Q7Z4L9 355 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 MST1RQ04912 1400 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 POLA2Q14181 598 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 DNAAF4Q8WXU2 420 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 OVOS2A0A0G2JMS6 1433 aa25.36■■□□□ 1.65
TTC39C-202ENST00000317571 ERC2O15083 957 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 C1orf141Q5JVX7 400 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 CASC1Q6TDU7 716 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 C19orf44Q9H6X5 657 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 ERBB3P21860 1342 aa25.35■■□□□ 1.65
TTC39C-202ENST00000317571 ZC3H6P61129 1189 aaKnown RBP25.35■■□□□ 1.65
TTC39C-202ENST00000317571 STAP2Q9UGK3 403 aa25.34■■□□□ 1.65
TTC39C-202ENST00000317571 TRAK2O60296 914 aa25.34■■□□□ 1.65
TTC39C-202ENST00000317571 EIF5BO60841 1220 aaKnown RBP25.33■■□□□ 1.65
TTC39C-202ENST00000317571 GIGYF1O75420 1035 aaPredicted RBP25.33■■□□□ 1.65
TTC39C-202ENST00000317571 HSP90AA1P07900 732 aaKnown RBP25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms