RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 PRIM1P49642 420 aaKnown RBP24.72■■□□□ 1.55
RABGAP1-201ENST00000317419 CFAP44Q96MT7 982 aa24.72■■□□□ 1.55
RABGAP1-201ENST00000317419 PAPPAQ13219 1627 aa24.72■■□□□ 1.55
RABGAP1-201ENST00000317419 CHL1O00533 1208 aa24.71■■□□□ 1.55
RABGAP1-201ENST00000317419 GOLGA2Q08379 1002 aa24.71■■□□□ 1.55
RABGAP1-201ENST00000317419 SPINK5Q9NQ38 1064 aaPredicted RBP24.71■■□□□ 1.55
RABGAP1-201ENST00000317419 PIGBQ92521 554 aa24.7■■□□□ 1.55
RABGAP1-201ENST00000317419 ACSBG1Q96GR2 724 aa24.7■■□□□ 1.55
RABGAP1-201ENST00000317419 YTHDC1Q96MU7 727 aaKnown RBP24.7■■□□□ 1.55
RABGAP1-201ENST00000317419 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.54
RABGAP1-201ENST00000317419 TRMT2AQ8IZ69 625 aaKnown RBP24.7■■□□□ 1.54
RABGAP1-201ENST00000317419 TMOD3Q9NYL9 352 aa24.7■■□□□ 1.54
RABGAP1-201ENST00000317419 KCNQ2O43526 872 aa24.69■■□□□ 1.54
RABGAP1-201ENST00000317419 GNAI1P63096 354 aa24.69■■□□□ 1.54
RABGAP1-201ENST00000317419 SLFN5Q08AF3 891 aa24.69■■□□□ 1.54
RABGAP1-201ENST00000317419 BCL11BQ9C0K0 894 aaPredicted RBP24.67■■□□□ 1.54
RABGAP1-201ENST00000317419 E9PSI1 815 aa24.67■■□□□ 1.54
RABGAP1-201ENST00000317419 BTBD11A6QL63 1104 aa24.66■■□□□ 1.54
RABGAP1-201ENST00000317419 PTF1AQ7RTS3 328 aa24.66■■□□□ 1.54
RABGAP1-201ENST00000317419 CDCA7LQ96GN5 454 aa24.66■■□□□ 1.54
RABGAP1-201ENST00000317419 MBIPQ9NS73 344 aa24.64■■□□□ 1.54
RABGAP1-201ENST00000317419 BTAF1O14981 1849 aa24.64■■□□□ 1.54
RABGAP1-201ENST00000317419 UBR2Q8IWV8 1755 aa24.64■■□□□ 1.54
RABGAP1-201ENST00000317419 SYTL4Q96C24 671 aaPredicted RBP24.64■■□□□ 1.53
RABGAP1-201ENST00000317419 ATG3Q9NT62 314 aa24.64■■□□□ 1.53
RABGAP1-201ENST00000317419 MIS18AQ9NYP9 233 aa24.64■■□□□ 1.53
RABGAP1-201ENST00000317419 TSPYL4Q9UJ04 414 aa24.63■■□□□ 1.53
RABGAP1-201ENST00000317419 ZNF790Q6PG37 636 aa24.63■■□□□ 1.53
RABGAP1-201ENST00000317419 MYH16Q9H6N6 1097 aa24.63■■□□□ 1.53
RABGAP1-201ENST00000317419 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
RABGAP1-201ENST00000317419 FANCIQ9NVI1 1328 aa24.62■■□□□ 1.53
RABGAP1-201ENST00000317419 HEG1Q9ULI3 1381 aa24.62■■□□□ 1.53
RABGAP1-201ENST00000317419 DUSP27Q5VZP5 1158 aa24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 ASAP1Q9ULH1 1129 aa24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 LAS1LQ9Y4W2 734 aaKnown RBP24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 TNS1Q9HBL0 1735 aaKnown RBP24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 KCNQ3O43525 872 aa24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 SLC39A6Q13433 755 aa24.61■■□□□ 1.53
RABGAP1-201ENST00000317419 TRIM37O94972 964 aa24.6■■□□□ 1.53
RABGAP1-201ENST00000317419 TSR2Q969E8 191 aaKnown RBP24.6■■□□□ 1.53
RABGAP1-201ENST00000317419 EIF4A1P60842 406 aaKnown RBP24.59■■□□□ 1.53
RABGAP1-201ENST00000317419 SMARCC1Q92922 1105 aaPredicted RBP24.58■■□□□ 1.53
RABGAP1-201ENST00000317419 ZNF831Q5JPB2 1677 aa24.57■■□□□ 1.52
RABGAP1-201ENST00000317419 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
RABGAP1-201ENST00000317419 EP400Q96L91 3159 aa24.56■■□□□ 1.52
RABGAP1-201ENST00000317419 TTC5Q8N0Z6 440 aa24.56■■□□□ 1.52
RABGAP1-201ENST00000317419 ZNF496Q96IT1 587 aaPredicted RBP24.56■■□□□ 1.52
RABGAP1-201ENST00000317419 LY75O60449 1722 aa24.55■■□□□ 1.52
RABGAP1-201ENST00000317419 KAT6BQ8WYB5 2073 aa24.55■■□□□ 1.52
RABGAP1-201ENST00000317419 PALLDQ8WX93 1383 aa24.55■■□□□ 1.52
RABGAP1-201ENST00000317419 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
RABGAP1-201ENST00000317419 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
RABGAP1-201ENST00000317419 FMNL2Q96PY5 1086 aa24.53■■□□□ 1.52
RABGAP1-201ENST00000317419 PLSCR1O15162 318 aa24.53■■□□□ 1.52
RABGAP1-201ENST00000317419 VSIG10Q8N0Z9 540 aa24.53■■□□□ 1.52
RABGAP1-201ENST00000317419 SLC4A9Q96Q91 983 aa24.52■■□□□ 1.52
RABGAP1-201ENST00000317419 SOS1Q07889 1333 aaPredicted RBP24.52■■□□□ 1.52
RABGAP1-201ENST00000317419 EXOSC9Q06265 439 aaKnown RBP24.52■■□□□ 1.52
RABGAP1-201ENST00000317419 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
RABGAP1-201ENST00000317419 C8orf58Q8NAV2 365 aa24.52■■□□□ 1.52
RABGAP1-201ENST00000317419 GIGYF1O75420 1035 aaPredicted RBP24.51■■□□□ 1.51
RABGAP1-201ENST00000317419 HOXB7P09629 217 aa24.5■■□□□ 1.51
RABGAP1-201ENST00000317419 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
RABGAP1-201ENST00000317419 CCDC125Q86Z20 511 aa24.5■■□□□ 1.51
RABGAP1-201ENST00000317419 TJP1Q07157 1748 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 C5P01031 1676 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 PTCD1O75127 700 aaKnown RBP24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 APBA3O96018 575 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 SIK1P57059 783 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 TSPYL6Q8N831 410 aa24.49■■□□□ 1.51
RABGAP1-201ENST00000317419 SNRPA1P09661 255 aaKnown RBP24.47■■□□□ 1.51
RABGAP1-201ENST00000317419 CT47B1P0C2W7 299 aaPredicted RBP24.47■■□□□ 1.51
RABGAP1-201ENST00000317419 LAMB4A4D0S4 1761 aa24.46■■□□□ 1.51
RABGAP1-201ENST00000317419 VAMP4O75379 141 aa24.46■■□□□ 1.51
RABGAP1-201ENST00000317419 RBM42Q9BTD8 480 aaKnown RBP24.46■■□□□ 1.51
RABGAP1-201ENST00000317419 TWISTNBQ3B726 338 aaPredicted RBP24.45■■□□□ 1.5
RABGAP1-201ENST00000317419 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.5
RABGAP1-201ENST00000317419 PRAMEF22A3QJZ6 481 aa24.44■■□□□ 1.5
RABGAP1-201ENST00000317419 PROM2Q8N271 834 aa24.44■■□□□ 1.5
RABGAP1-201ENST00000317419 ITPK1Q13572 414 aa24.44■■□□□ 1.5
RABGAP1-201ENST00000317419 SLC27A3Q5K4L6 730 aa24.44■■□□□ 1.5
RABGAP1-201ENST00000317419 COL5A3P25940 1745 aaPredicted RBP24.44■■□□□ 1.5
RABGAP1-201ENST00000317419 CAMKK2Q96RR4 588 aa24.43■■□□□ 1.5
RABGAP1-201ENST00000317419 DNAJC10Q8IXB1 793 aa24.43■■□□□ 1.5
RABGAP1-201ENST00000317419 UPF1Q92900 1129 aaKnown RBP eCLIP24.43■■□□□ 1.5
RABGAP1-201ENST00000317419 ATP6V1AP38606 617 aa24.42■■□□□ 1.5
RABGAP1-201ENST00000317419 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
RABGAP1-201ENST00000317419 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
RABGAP1-201ENST00000317419 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
RABGAP1-201ENST00000317419 TXNRD1Q16881 649 aa24.41■■□□□ 1.5
RABGAP1-201ENST00000317419 LRRC4BQ9NT99 713 aa24.41■■□□□ 1.5
RABGAP1-201ENST00000317419 CCNL1Q9UK58 526 aaPredicted RBP24.41■■□□□ 1.5
RABGAP1-201ENST00000317419 RREB1Q92766 1687 aa24.41■■□□□ 1.5
RABGAP1-201ENST00000317419 TAF1LQ8IZX4 1826 aa24.4■■□□□ 1.5
RABGAP1-201ENST00000317419 SF3B2Q13435 895 aaKnown RBP24.4■■□□□ 1.5
RABGAP1-201ENST00000317419 CYP19A1P11511 503 aaPredicted RBP24.4■■□□□ 1.5
RABGAP1-201ENST00000317419 BAG6P46379 1132 aa24.39■■□□□ 1.5
RABGAP1-201ENST00000317419 CHMP4AQ9BY43 222 aa24.39■■□□□ 1.49
RABGAP1-201ENST00000317419 LINC00116Q8NCU8 138 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms