RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 ATP10DQ9P241 1426 aa29.4■■■□□ 2.3
APBA3-201ENST00000316757 CCDC30Q5VVM6 783 aa29.4■■■□□ 2.3
APBA3-201ENST00000316757 G2E3Q7L622 706 aa29.4■■■□□ 2.3
APBA3-201ENST00000316757 RPAP2Q8IXW5 612 aaPredicted RBP29.4■■■□□ 2.3
APBA3-201ENST00000316757 PLEKHO1Q53GL0 409 aaPredicted RBP29.4■■■□□ 2.3
APBA3-201ENST00000316757 ANKRD44Q8N8A2 993 aa29.4■■■□□ 2.3
APBA3-201ENST00000316757 CEMIPQ8WUJ3 1361 aa29.39■■■□□ 2.3
APBA3-201ENST00000316757 AMOTQ4VCS5 1084 aa29.39■■■□□ 2.3
APBA3-201ENST00000316757 DCTPP1Q9H773 170 aa29.38■■■□□ 2.29
APBA3-201ENST00000316757 RTL5Q5HYW3 569 aaPredicted RBP29.38■■■□□ 2.29
APBA3-201ENST00000316757 CCT4P50991 539 aaKnown RBP29.37■■■□□ 2.29
APBA3-201ENST00000316757 BMP2KLQ5H9B9 411 aa29.37■■■□□ 2.29
APBA3-201ENST00000316757 KDM3BQ7LBC6 1761 aa29.36■■■□□ 2.29
APBA3-201ENST00000316757 BECN1Q14457 450 aa29.36■■■□□ 2.29
APBA3-201ENST00000316757 CHRNA2Q15822 529 aa29.35■■■□□ 2.29
APBA3-201ENST00000316757 ZNF530Q6P9A1 599 aaPredicted RBP29.35■■■□□ 2.29
APBA3-201ENST00000316757 AKAP4Q5JQC9 854 aa29.35■■■□□ 2.29
APBA3-201ENST00000316757 CEP85Q6P2H3 762 aa29.35■■■□□ 2.29
APBA3-201ENST00000316757 MEIS3Q99687 375 aa29.35■■■□□ 2.29
APBA3-201ENST00000316757 ROBO1Q9Y6N7 1651 aa29.34■■■□□ 2.29
APBA3-201ENST00000316757 LTBP4Q8N2S1 1624 aa29.34■■■□□ 2.29
APBA3-201ENST00000316757 NLRP2Q9NX02 1062 aa29.33■■■□□ 2.29
APBA3-201ENST00000316757 USP35Q9P2H5 1018 aa29.33■■■□□ 2.29
APBA3-201ENST00000316757 FLIIQ13045 1269 aa29.32■■■□□ 2.28
APBA3-201ENST00000316757 N4BP2Q86UW6 1770 aaPredicted RBP29.32■■■□□ 2.28
APBA3-201ENST00000316757 F6X3S4 739 aa29.32■■■□□ 2.28
APBA3-201ENST00000316757 MFAP1P55081 439 aaKnown RBP29.32■■■□□ 2.28
APBA3-201ENST00000316757 SLC4A10Q6U841 1118 aa29.32■■■□□ 2.28
APBA3-201ENST00000316757 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
APBA3-201ENST00000316757 OVOS2A0A0G2JMS6 1433 aa29.31■■■□□ 2.28
APBA3-201ENST00000316757 CSB-PGBD3P0DP91 1061 aa29.3■■■□□ 2.28
APBA3-201ENST00000316757 C22orf23Q9BZE7 217 aa29.3■■■□□ 2.28
APBA3-201ENST00000316757 SIPA1L3O60292 1781 aaPredicted RBP29.3■■■□□ 2.28
APBA3-201ENST00000316757 C1orf141Q5JVX7 400 aa29.3■■■□□ 2.28
APBA3-201ENST00000316757 PKD1L3Q7Z443 1732 aa29.29■■■□□ 2.28
APBA3-201ENST00000316757 LGR6Q9HBX8 967 aa29.29■■■□□ 2.28
APBA3-201ENST00000316757 FKBP5Q13451 457 aaPredicted RBP29.28■■■□□ 2.28
APBA3-201ENST00000316757 RAPGEF4Q8WZA2 1011 aa29.28■■■□□ 2.28
APBA3-201ENST00000316757 SCN11AQ9UI33 1791 aa29.28■■■□□ 2.28
APBA3-201ENST00000316757 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
APBA3-201ENST00000316757 PLEKHG2Q9H7P9 1386 aa29.27■■■□□ 2.28
APBA3-201ENST00000316757 MEGF6O75095 1541 aa29.26■■■□□ 2.27
APBA3-201ENST00000316757 NECTIN2Q92692 538 aa29.26■■■□□ 2.27
APBA3-201ENST00000316757 AHDC1Q5TGY3 1603 aaPredicted RBP29.26■■■□□ 2.27
APBA3-201ENST00000316757 PXDNLA1KZ92 1463 aa29.26■■■□□ 2.27
APBA3-201ENST00000316757 HMMRO75330 724 aa29.25■■■□□ 2.27
APBA3-201ENST00000316757 HDGFL1Q5TGJ6 251 aa29.25■■■□□ 2.27
APBA3-201ENST00000316757 PARP4Q9UKK3 1724 aaKnown RBP29.25■■■□□ 2.27
APBA3-201ENST00000316757 HOXB7P09629 217 aa29.24■■■□□ 2.27
APBA3-201ENST00000316757 EIF4A1P60842 406 aaKnown RBP29.24■■■□□ 2.27
APBA3-201ENST00000316757 TATP17735 454 aaPredicted RBP29.24■■■□□ 2.27
APBA3-201ENST00000316757 TEFQ10587 303 aa29.24■■■□□ 2.27
APBA3-201ENST00000316757 MPRIPQ6WCQ1 1025 aa29.24■■■□□ 2.27
APBA3-201ENST00000316757 PLEKHM2Q8IWE5 1019 aa29.23■■■□□ 2.27
APBA3-201ENST00000316757 CHMP4AQ9BY43 222 aa29.23■■■□□ 2.27
APBA3-201ENST00000316757 RNMTO43148 476 aaKnown RBP29.22■■■□□ 2.27
APBA3-201ENST00000316757 COL5A2P05997 1499 aaPredicted RBP29.22■■■□□ 2.27
APBA3-201ENST00000316757 GNAI2P04899 355 aa29.22■■■□□ 2.27
APBA3-201ENST00000316757 GNAI3P08754 354 aa29.21■■■□□ 2.27
APBA3-201ENST00000316757 TBC1D2Q9BYX2 928 aa29.19■■■□□ 2.26
APBA3-201ENST00000316757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.19■■■□□ 2.26
APBA3-201ENST00000316757 WDR17Q8IZU2 1322 aa29.19■■■□□ 2.26
APBA3-201ENST00000316757 COL22A1Q8NFW1 1626 aaPredicted RBP29.19■■■□□ 2.26
APBA3-201ENST00000316757 BTBD11A6QL63 1104 aa29.19■■■□□ 2.26
APBA3-201ENST00000316757 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
APBA3-201ENST00000316757 RBM25P49756 843 aaKnown RBP29.18■■■□□ 2.26
APBA3-201ENST00000316757 NFKBIBQ15653 356 aa29.17■■■□□ 2.26
APBA3-201ENST00000316757 GSPT1P15170 499 aaKnown RBP29.16■■■□□ 2.26
APBA3-201ENST00000316757 TTC22Q5TAA0 569 aa29.16■■■□□ 2.26
APBA3-201ENST00000316757 TBC1D9Q6ZT07 1266 aa29.16■■■□□ 2.26
APBA3-201ENST00000316757 CDC45O75419 566 aa29.15■■■□□ 2.26
APBA3-201ENST00000316757 C16orf71Q8IYS4 520 aaPredicted RBP29.15■■■□□ 2.26
APBA3-201ENST00000316757 PHAXQ9H814 394 aaKnown RBP29.15■■■□□ 2.26
APBA3-201ENST00000316757 KCNQ3O43525 872 aa29.14■■■□□ 2.26
APBA3-201ENST00000316757 EIF2S2P20042 333 aaKnown RBP29.14■■■□□ 2.26
APBA3-201ENST00000316757 PHLPP1O60346 1717 aa29.13■■■□□ 2.25
APBA3-201ENST00000316757 PHKG2P15735 406 aa29.13■■■□□ 2.25
APBA3-201ENST00000316757 DEKP35659 375 aaKnown RBP29.13■■■□□ 2.25
APBA3-201ENST00000316757 KDM6AO15550 1401 aaPredicted RBP29.12■■■□□ 2.25
APBA3-201ENST00000316757 EIF5BO60841 1220 aaKnown RBP29.12■■■□□ 2.25
APBA3-201ENST00000316757 TOM1L2Q6ZVM7 507 aa29.12■■■□□ 2.25
APBA3-201ENST00000316757 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
APBA3-201ENST00000316757 SMARCA5O60264 1052 aaPredicted RBP29.11■■■□□ 2.25
APBA3-201ENST00000316757 ATP8B2P98198 1209 aa29.11■■■□□ 2.25
APBA3-201ENST00000316757 IFNL2Q8IZJ0 200 aa29.11■■■□□ 2.25
APBA3-201ENST00000316757 APBB1O00213 710 aa29.1■■■□□ 2.25
APBA3-201ENST00000316757 CHPF2Q9P2E5 772 aa29.1■■■□□ 2.25
APBA3-201ENST00000316757 OTUD7AQ8TE49 926 aaPredicted RBP29.09■■■□□ 2.25
APBA3-201ENST00000316757 USP44Q9H0E7 712 aa29.09■■■□□ 2.25
APBA3-201ENST00000316757 MRC1P22897 1456 aa29.09■■■□□ 2.25
APBA3-201ENST00000316757 HEG1Q9ULI3 1381 aa29.08■■■□□ 2.25
APBA3-201ENST00000316757 SHANK3Q9BYB0 1731 aa29.08■■■□□ 2.25
APBA3-201ENST00000316757 COL16A1Q07092 1604 aaPredicted RBP29.07■■■□□ 2.24
APBA3-201ENST00000316757 SRCIN1Q9C0H9 1055 aa29.07■■■□□ 2.24
APBA3-201ENST00000316757 ANTXR1Q9H6X2 564 aa29.07■■■□□ 2.24
APBA3-201ENST00000316757 UBTFL1P0CB47 393 aaPredicted RBP29.06■■■□□ 2.24
APBA3-201ENST00000316757 CARD10Q9BWT7 1032 aa29.06■■■□□ 2.24
APBA3-201ENST00000316757 BCL11AQ9H165 835 aa29.06■■■□□ 2.24
APBA3-201ENST00000316757 SLKQ9H2G2 1235 aaPredicted RBP29.06■■■□□ 2.24
APBA3-201ENST00000316757 LRRFIP2Q9Y608 721 aaKnown RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms