RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 ATP10DQ9P241 1426 aa17.39■□□□□ 0.37
VAMP2-201ENST00000316509 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
VAMP2-201ENST00000316509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
VAMP2-201ENST00000316509 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
VAMP2-201ENST00000316509 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
VAMP2-201ENST00000316509 ERBB3P21860 1342 aa17.37■□□□□ 0.37
VAMP2-201ENST00000316509 GNAI2P04899 355 aa17.37■□□□□ 0.37
VAMP2-201ENST00000316509 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
VAMP2-201ENST00000316509 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
VAMP2-201ENST00000316509 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
VAMP2-201ENST00000316509 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
VAMP2-201ENST00000316509 MEIS3Q99687 375 aa17.36■□□□□ 0.37
VAMP2-201ENST00000316509 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
VAMP2-201ENST00000316509 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
VAMP2-201ENST00000316509 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
VAMP2-201ENST00000316509 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
VAMP2-201ENST00000316509 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
VAMP2-201ENST00000316509 SPATA31A3Q5VYP0 1347 aa17.35■□□□□ 0.37
VAMP2-201ENST00000316509 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
VAMP2-201ENST00000316509 CPDO75976 1380 aa17.34■□□□□ 0.37
VAMP2-201ENST00000316509 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
VAMP2-201ENST00000316509 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
VAMP2-201ENST00000316509 RGPD2P0DJD1 1756 aa17.34■□□□□ 0.37
VAMP2-201ENST00000316509 PXDNQ92626 1479 aa17.33■□□□□ 0.36
VAMP2-201ENST00000316509 F6X3S4 739 aa17.33■□□□□ 0.36
VAMP2-201ENST00000316509 SPG7Q9UQ90 795 aa17.33■□□□□ 0.36
VAMP2-201ENST00000316509 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
VAMP2-201ENST00000316509 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
VAMP2-201ENST00000316509 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
VAMP2-201ENST00000316509 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
VAMP2-201ENST00000316509 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
VAMP2-201ENST00000316509 ATP8B2P98198 1209 aa17.32■□□□□ 0.36
VAMP2-201ENST00000316509 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
VAMP2-201ENST00000316509 PLEKHM2Q8IWE5 1019 aa17.32■□□□□ 0.36
VAMP2-201ENST00000316509 N4BP2Q86UW6 1770 aaPredicted RBP17.31■□□□□ 0.36
VAMP2-201ENST00000316509 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
VAMP2-201ENST00000316509 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
VAMP2-201ENST00000316509 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
VAMP2-201ENST00000316509 COL18A1P39060 1754 aa17.3■□□□□ 0.36
VAMP2-201ENST00000316509 CDC45O75419 566 aa17.29■□□□□ 0.36
VAMP2-201ENST00000316509 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
VAMP2-201ENST00000316509 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
VAMP2-201ENST00000316509 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
VAMP2-201ENST00000316509 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
VAMP2-201ENST00000316509 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
VAMP2-201ENST00000316509 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
VAMP2-201ENST00000316509 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
VAMP2-201ENST00000316509 BRINP3Q76B58 766 aa17.28■□□□□ 0.36
VAMP2-201ENST00000316509 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
VAMP2-201ENST00000316509 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
VAMP2-201ENST00000316509 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
VAMP2-201ENST00000316509 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
VAMP2-201ENST00000316509 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
VAMP2-201ENST00000316509 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
VAMP2-201ENST00000316509 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 PHKG2P15735 406 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 DNAAF4Q8WXU2 420 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
VAMP2-201ENST00000316509 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
VAMP2-201ENST00000316509 KCNQ3O43525 872 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 NBR1Q14596 966 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
VAMP2-201ENST00000316509 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
VAMP2-201ENST00000316509 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
VAMP2-201ENST00000316509 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
VAMP2-201ENST00000316509 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
VAMP2-201ENST00000316509 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
VAMP2-201ENST00000316509 BEND3Q5T5X7 828 aa17.23■□□□□ 0.35
VAMP2-201ENST00000316509 SNX21Q969T3 373 aa17.23■□□□□ 0.35
VAMP2-201ENST00000316509 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
VAMP2-201ENST00000316509 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
VAMP2-201ENST00000316509 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
VAMP2-201ENST00000316509 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
VAMP2-201ENST00000316509 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
VAMP2-201ENST00000316509 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
VAMP2-201ENST00000316509 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
VAMP2-201ENST00000316509 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
VAMP2-201ENST00000316509 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
VAMP2-201ENST00000316509 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
VAMP2-201ENST00000316509 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
VAMP2-201ENST00000316509 POLA2Q14181 598 aa17.21■□□□□ 0.34
VAMP2-201ENST00000316509 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.34
VAMP2-201ENST00000316509 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.34
VAMP2-201ENST00000316509 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.34
VAMP2-201ENST00000316509 AOX1Q06278 1338 aa17.2■□□□□ 0.34
VAMP2-201ENST00000316509 MRC1P22897 1456 aa17.2■□□□□ 0.34
VAMP2-201ENST00000316509 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
VAMP2-201ENST00000316509 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
VAMP2-201ENST00000316509 MEGF6O75095 1541 aa17.19■□□□□ 0.34
VAMP2-201ENST00000316509 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms