RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 MYOM1P52179 1685 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 NOM1Q5C9Z4 860 aaKnown RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 FRAT2O75474 233 aaPredicted RBP12.98□□□□□ -0.33
HNF4A-201ENST00000316099 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
HNF4A-201ENST00000316099 MPRIPQ6WCQ1 1025 aa12.97□□□□□ -0.33
HNF4A-201ENST00000316099 CCAR2Q8N163 923 aaKnown RBP12.97□□□□□ -0.33
HNF4A-201ENST00000316099 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
HNF4A-201ENST00000316099 CDC45O75419 566 aa12.97□□□□□ -0.33
HNF4A-201ENST00000316099 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-201ENST00000316099 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
HNF4A-201ENST00000316099 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
HNF4A-201ENST00000316099 RLBP1P12271 317 aa12.96□□□□□ -0.33
HNF4A-201ENST00000316099 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 TRMT2AQ8IZ69 625 aaKnown RBP12.96□□□□□ -0.33
HNF4A-201ENST00000316099 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.33
HNF4A-201ENST00000316099 CLSTN1O94985 981 aa12.96□□□□□ -0.34
HNF4A-201ENST00000316099 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.34
HNF4A-201ENST00000316099 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.34
HNF4A-201ENST00000316099 MBD3O95983 291 aa12.96□□□□□ -0.34
HNF4A-201ENST00000316099 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.34
HNF4A-201ENST00000316099 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
HNF4A-201ENST00000316099 CCT4P50991 539 aaKnown RBP12.95□□□□□ -0.34
HNF4A-201ENST00000316099 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 NEXNQ0ZGT2 675 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 GCP02774 474 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
HNF4A-201ENST00000316099 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
HNF4A-201ENST00000316099 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
HNF4A-201ENST00000316099 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 VAMP4O75379 141 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 IP6K1Q92551 441 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 CABP4P57796 275 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 CREBRFQ8IUR6 639 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
HNF4A-201ENST00000316099 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
HNF4A-201ENST00000316099 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
HNF4A-201ENST00000316099 GNAI2P04899 355 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 GNAI3P08754 354 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
HNF4A-201ENST00000316099 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 F6X3S4 739 aa12.93□□□□□ -0.34
HNF4A-201ENST00000316099 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
HNF4A-201ENST00000316099 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
HNF4A-201ENST00000316099 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
HNF4A-201ENST00000316099 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
HNF4A-201ENST00000316099 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
HNF4A-201ENST00000316099 MED14O60244 1454 aa12.92□□□□□ -0.34
HNF4A-201ENST00000316099 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
HNF4A-201ENST00000316099 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
HNF4A-201ENST00000316099 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
HNF4A-201ENST00000316099 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
HNF4A-201ENST00000316099 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
HNF4A-201ENST00000316099 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
HNF4A-201ENST00000316099 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 G3V3G9 751 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
HNF4A-201ENST00000316099 MYL6BP14649 208 aa12.91□□□□□ -0.34
HNF4A-201ENST00000316099 PTPRCP08575 1304 aa12.9□□□□□ -0.34
HNF4A-201ENST00000316099 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
HNF4A-201ENST00000316099 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
HNF4A-201ENST00000316099 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
HNF4A-201ENST00000316099 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
HNF4A-201ENST00000316099 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
HNF4A-201ENST00000316099 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
HNF4A-201ENST00000316099 RABEP1Q15276 862 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 MCM2P49736 904 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 NAT10Q9H0A0 1025 aaKnown RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 CEP170BQ9Y4F5 1589 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 KIF20BQ96Q89 1820 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 SRCIN1Q9C0H9 1055 aa12.89□□□□□ -0.35
HNF4A-201ENST00000316099 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
HNF4A-201ENST00000316099 PES1O00541 588 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms