RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 RAB3GAP2Q9H2M9 1393 aa5.71□□□□□ -1.49
POLR2B-201ENST00000314595 KIF20BQ96Q89 1820 aa5.71□□□□□ -1.49
POLR2B-201ENST00000314595 RC3H1Q5TC82 1133 aaKnown RBP5.71□□□□□ -1.5
POLR2B-201ENST00000314595 HIRIP3Q9BW71 556 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-201ENST00000314595 CCNL1Q9UK58 526 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-201ENST00000314595 KDM2AQ9Y2K7 1162 aa5.71□□□□□ -1.5
POLR2B-201ENST00000314595 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.5
POLR2B-201ENST00000314595 RASSF10A6NK89 507 aa5.71□□□□□ -1.5
POLR2B-201ENST00000314595 FOXN1O15353 648 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 HSPA8P11142 646 aaKnown RBP5.7□□□□□ -1.5
POLR2B-201ENST00000314595 PALLDQ8WX93 1383 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 CNTNAP4Q9C0A0 1308 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 GLTPD2A6NH11 291 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 PDZRN3Q9UPQ7 1066 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 TRAK1Q9UPV9 953 aa5.7□□□□□ -1.5
POLR2B-201ENST00000314595 NLRP6P59044 892 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 IP6K1Q92551 441 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 UBR2Q8IWV8 1755 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 ANKRD31Q8N7Z5 1873 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 FAM161AQ3B820 660 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 GCC1Q96CN9 775 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 L3MBTL3Q96JM7 780 aaPredicted RBP5.69□□□□□ -1.5
POLR2B-201ENST00000314595 TONSLQ96HA7 1378 aa5.69□□□□□ -1.5
POLR2B-201ENST00000314595 VEGFAP15692 232 aaPredicted RBP5.69□□□□□ -1.5
POLR2B-201ENST00000314595 PRPF38BQ5VTL8 546 aaKnown RBP5.69□□□□□ -1.5
POLR2B-201ENST00000314595 COL11A2P13942 1736 aaPredicted RBP5.68□□□□□ -1.5
POLR2B-201ENST00000314595 CA12O43570 354 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 RGL3Q3MIN7 710 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 HHIPL1Q96JK4 782 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 CENPJQ9HC77 1338 aaPredicted RBP5.68□□□□□ -1.5
POLR2B-201ENST00000314595 POTECB2RU33 542 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 NLGN1Q8N2Q7 840 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 CCDC87Q9NVE4 849 aa5.68□□□□□ -1.5
POLR2B-201ENST00000314595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.68□□□□□ -1.58e-7■■■□□ 16.1
POLR2B-201ENST00000314595 PCDH11XQ9BZA7 1347 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 PCDH11YQ9BZA8 1340 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 MRC1P22897 1456 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 MAP2K1Q02750 393 aaPredicted RBP5.67□□□□□ -1.5
POLR2B-201ENST00000314595 CAPN15O75808 1086 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 CHADLQ6NUI6 762 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 PPP4R2Q9NY27 417 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 A0A1W2PP64 1363 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 EVC2Q86UK5 1308 aa5.67□□□□□ -1.5
POLR2B-201ENST00000314595 ANKRD24Q8TF21 1146 aa5.66□□□□□ -1.5
POLR2B-201ENST00000314595 ACSBG1Q96GR2 724 aa5.66□□□□□ -1.5
POLR2B-201ENST00000314595 AIDAQ96BJ3 306 aa5.66□□□□□ -1.5
POLR2B-201ENST00000314595 NOP58Q9Y2X3 529 aaKnown RBP5.66□□□□□ -1.5
POLR2B-201ENST00000314595 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
POLR2B-201ENST00000314595 SCN11AQ9UI33 1791 aa5.66□□□□□ -1.5
POLR2B-201ENST00000314595 LMNB1P20700 586 aa5.65□□□□□ -1.5
POLR2B-201ENST00000314595 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
POLR2B-201ENST00000314595 KTN1Q86UP2 1357 aaKnown RBP5.65□□□□□ -1.5
POLR2B-201ENST00000314595 PRIM1P49642 420 aaKnown RBP5.65□□□□□ -1.5
POLR2B-201ENST00000314595 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.5
POLR2B-201ENST00000314595 PIM2Q9P1W9 311 aa5.65□□□□□ -1.5
POLR2B-201ENST00000314595 RRAGCQ9HB90 399 aa5.65□□□□□ -1.51
POLR2B-201ENST00000314595 LDHDQ86WU2 507 aa5.64□□□□□ -1.51
POLR2B-201ENST00000314595 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
POLR2B-201ENST00000314595 ZBED9Q6R2W3 1325 aa5.64□□□□□ -1.51
POLR2B-201ENST00000314595 SAFB2Q14151 953 aaKnown RBP eCLIP5.64□□□□□ -1.51
POLR2B-201ENST00000314595 AK7Q96M32 723 aa5.64□□□□□ -1.51
POLR2B-201ENST00000314595 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
POLR2B-201ENST00000314595 DALRD3Q5D0E6 543 aaKnown RBP5.64□□□□□ -1.51
POLR2B-201ENST00000314595 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
POLR2B-201ENST00000314595 SNED1Q8TER0 1413 aa5.64□□□□□ -1.51
POLR2B-201ENST00000314595 RGL2O15211 777 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 CSB-PGBD3P0DP91 1061 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 SAGE1Q9NXZ1 904 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.63□□□□□ -1.51
POLR2B-201ENST00000314595 DPEP1P16444 411 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 AMIGO3Q86WK7 504 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 IL27Q8NEV9 243 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 TMEM88BA6NKF7 163 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 ITGBL1O95965 494 aaPredicted RBP5.63□□□□□ -1.51
POLR2B-201ENST00000314595 MAP2K2P36507 400 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 LINC00116Q8NCU8 138 aa5.63□□□□□ -1.51
POLR2B-201ENST00000314595 SLC24A1O60721 1099 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 TNRC18O15417 2968 aaPredicted RBP5.62□□□□□ -1.51
POLR2B-201ENST00000314595 TM4SF1P30408 202 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 HTRA3P83110 453 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 KDM3BQ7LBC6 1761 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 UTRNP46939 3433 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 MMP10P09238 476 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 GYS1P13807 737 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 VEGFBP49765 207 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 TMF1P82094 1093 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 ARHGAP27Q6ZUM4 889 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 RNF181Q9P0P0 153 aa5.62□□□□□ -1.51
POLR2B-201ENST00000314595 RIC1Q4ADV7 1423 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 RPS6KA4O75676 772 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 KLHL34Q8N239 644 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 SIPA1L3O60292 1781 aaPredicted RBP5.61□□□□□ -1.51
POLR2B-201ENST00000314595 IQCA1LA6NCM1 817 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 HOXC9P31274 260 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 NOM1Q5C9Z4 860 aaKnown RBP5.61□□□□□ -1.51
POLR2B-201ENST00000314595 MSL1Q68DK7 614 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 CCDC136Q96JN2 1154 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 NLRP2Q9NX02 1062 aa5.61□□□□□ -1.51
POLR2B-201ENST00000314595 LOC102724428A0A0B4J2F2 783 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms