RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ATP8B2P98198 1209 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 SDSP20132 328 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CEP85Q6P2H3 762 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 JAKMIP1Q96N16 626 aaKnown RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 TRDNQ13061 729 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CPLX2Q6PUV4 134 aaKnown RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 SSFA2P28290 1259 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 NCBP3Q53F19 620 aaKnown RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 TTC39AQ5SRH9 613 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 OTUD7AQ8TE49 926 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 TRPM2O94759 1503 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 PHF14O94880 888 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 FKBP4Q02790 459 aaKnown RBP eCLIP7.44□□□□□ -1.22
PRKDC-201ENST00000314191 IP6K1Q92551 441 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 ROBO2Q9HCK4 1378 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 HIP1O00291 1037 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 CWF19L2Q2TBE0 894 aaKnown RBP7.43□□□□□ -1.22
PRKDC-201ENST00000314191 TMOD3Q9NYL9 352 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 PA2G4Q9UQ80 394 aaKnown RBP7.43□□□□□ -1.22
PRKDC-201ENST00000314191 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 CCDC158Q5M9N0 1113 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 SYNE3Q6ZMZ3 975 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 COPS6Q7L5N1 327 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 VPS37DQ86XT2 251 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 PDRG1Q9NUG6 133 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 MYOM2P54296 1465 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 ZMYM4Q5VZL5 1548 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 RALYLQ86SE5 291 aaKnown RBP7.43□□□□□ -1.22
PRKDC-201ENST00000314191 PIK3R4Q99570 1358 aa7.43□□□□□ -1.22
PRKDC-201ENST00000314191 CIZ1Q9ULV3 898 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-201ENST00000314191 RNMTO43148 476 aaKnown RBP7.42□□□□□ -1.22
PRKDC-201ENST00000314191 HYPKQ9NX55 129 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 G3V3G9 751 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 DCAF8Q5TAQ9 597 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 NFATC2IPQ8NCF5 419 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 ANKRD13DQ6ZTN6 518 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 UBE3BQ7Z3V4 1068 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 DDX17Q92841 729 aaKnown RBP7.42□□□□□ -1.22
PRKDC-201ENST00000314191 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-201ENST00000314191 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 FIBPO43427 364 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 BLOC1S2Q6QNY1 142 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 ZCRB1Q8TBF4 217 aaKnown RBP7.42□□□□□ -1.22
PRKDC-201ENST00000314191 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 ECHDC1Q9NTX5 307 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 CCDC83Q8IWF9 413 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 KDM5CP41229 1560 aa7.42□□□□□ -1.22
PRKDC-201ENST00000314191 CHMP4CQ96CF2 233 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 SBNO1A3KN83 1393 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 SNRPA1P09661 255 aaKnown RBP7.41□□□□□ -1.22
PRKDC-201ENST00000314191 IFIT1P09914 478 aaKnown RBP7.41□□□□□ -1.22
PRKDC-201ENST00000314191 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 TNPO1Q92973 898 aaKnown RBP7.41□□□□□ -1.22
PRKDC-201ENST00000314191 GPTP24298 496 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 KSR2Q6VAB6 950 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 FERMT3Q86UX7 667 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 MAP3K5Q99683 1374 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 TRIM29Q14134 588 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 IL17REQ8NFR9 667 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 USP19O94966 1318 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 BICDL1Q6ZP65 573 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 NPHP3Q7Z494 1330 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 ZFYVE16Q7Z3T8 1539 aa7.41□□□□□ -1.22
PRKDC-201ENST00000314191 STARD3NLO95772 234 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 CEBPZQ03701 1054 aaKnown RBP7.4□□□□□ -1.22
PRKDC-201ENST00000314191 NRDCO43847 1150 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 KCNQ3O43525 872 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 TMX4Q9H1E5 349 aaPredicted RBP7.4□□□□□ -1.22
PRKDC-201ENST00000314191 BECN2A8MW95 431 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 CASTP20810 708 aaKnown RBP7.4□□□□□ -1.22
PRKDC-201ENST00000314191 LARP1BQ659C4 914 aaKnown RBP7.4□□□□□ -1.22
PRKDC-201ENST00000314191 ARID3AQ99856 593 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 MEX3CQ5U5Q3 659 aaKnown RBP7.4□□□□□ -1.22
PRKDC-201ENST00000314191 LMBR1LQ6UX01 489 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 SNRKQ9NRH2 765 aa7.4□□□□□ -1.22
PRKDC-201ENST00000314191 RRP12Q5JTH9 1297 aaKnown RBP7.4□□□□□ -1.23
PRKDC-201ENST00000314191 RASSF8Q8NHQ8 419 aa7.4□□□□□ -1.23
PRKDC-201ENST00000314191 WDR33Q9C0J8 1336 aaKnown RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 IDH1O75874 414 aaKnown RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 FBXW7Q969H0 707 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 EXOC5O00471 708 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 LINS1Q8NG48 757 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 AKAP17AQ02040 695 aaKnown RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 NASPP49321 788 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 MSH6P52701 1360 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms