RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.44
SEC16A-204ENST00000313084 CRB1P82279 1406 aa12.27□□□□□ -0.44
SEC16A-204ENST00000313084 REREQ9P2R6 1566 aa12.27□□□□□ -0.44
SEC16A-204ENST00000313084 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
SEC16A-204ENST00000313084 PI4KAP2A4QPH2 592 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 PTPRCP08575 1304 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 CASC1Q6TDU7 716 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 PI4KAP1Q8N8J0 262 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 SLC39A6Q13433 755 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 PKP1Q13835 747 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 BTBD11A6QL63 1104 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
SEC16A-204ENST00000313084 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
SEC16A-204ENST00000313084 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
SEC16A-204ENST00000313084 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
SEC16A-204ENST00000313084 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
SEC16A-204ENST00000313084 RGS12O14924 1447 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-204ENST00000313084 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
SEC16A-204ENST00000313084 C3P01024 1663 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
SEC16A-204ENST00000313084 MYL6BP14649 208 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 PDE1AP54750 535 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 ZGPATQ8N5A5 531 aaKnown RBP12.24□□□□□ -0.45
SEC16A-204ENST00000313084 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
SEC16A-204ENST00000313084 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 GCP02774 474 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 PROSER3Q2NL68 480 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
SEC16A-204ENST00000313084 NEK4P51957 841 aa12.23□□□□□ -0.45
SEC16A-204ENST00000313084 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
SEC16A-204ENST00000313084 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
SEC16A-204ENST00000313084 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
SEC16A-204ENST00000313084 GOLGA6L3A6NEY3 463 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 MX1P20591 662 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 SIL1Q9H173 461 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
SEC16A-204ENST00000313084 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
SEC16A-204ENST00000313084 GNAI3P08754 354 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
SEC16A-204ENST00000313084 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
SEC16A-204ENST00000313084 IP6K1Q92551 441 aa12.21□□□□□ -0.45
SEC16A-204ENST00000313084 SSH2Q76I76 1423 aa12.21□□□□□ -0.45
SEC16A-204ENST00000313084 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-204ENST00000313084 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
SEC16A-204ENST00000313084 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
SEC16A-204ENST00000313084 HSPA2P54652 639 aa12.2□□□□□ -0.46
SEC16A-204ENST00000313084 PALD1Q9ULE6 856 aa12.2□□□□□ -0.46
SEC16A-204ENST00000313084 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
SEC16A-204ENST00000313084 ERC2O15083 957 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 KRT28Q7Z3Y7 464 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 IL25Q9H293 177 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 MAP3K2Q9Y2U5 619 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 KDRP35968 1356 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 REC8O95072 547 aa12.19□□□□□ -0.46
SEC16A-204ENST00000313084 EIF4A1P60842 406 aaKnown RBP12.19□□□□□ -0.46
SEC16A-204ENST00000313084 AK9Q5TCS8 1911 aa12.18□□□□□ -0.46
SEC16A-204ENST00000313084 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEC16A-204ENST00000313084 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-204ENST00000313084 CWC27Q6UX04 472 aaKnown RBP12.18□□□□□ -0.46
SEC16A-204ENST00000313084 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
SEC16A-204ENST00000313084 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
SEC16A-204ENST00000313084 ST18O60284 1047 aa12.18□□□□□ -0.46
SEC16A-204ENST00000313084 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
SEC16A-204ENST00000313084 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-204ENST00000313084 CPA1P15085 419 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 RABEP1Q15276 862 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
SEC16A-204ENST00000313084 SNX21Q969T3 373 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 A0A0G2JS52 829 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
SEC16A-204ENST00000313084 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
SEC16A-204ENST00000313084 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
SEC16A-204ENST00000313084 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
SEC16A-204ENST00000313084 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
SEC16A-204ENST00000313084 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
SEC16A-204ENST00000313084 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
SEC16A-204ENST00000313084 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
SEC16A-204ENST00000313084 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
SEC16A-204ENST00000313084 CAVIN1Q6NZI2 390 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms