RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 NECTIN2Q92692 538 aa28.6■■■□□ 2.17
CTSF-201ENST00000310325 AXIN2Q9Y2T1 843 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 PXDNQ92626 1479 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 C22orf23Q9BZE7 217 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 OVOS2A0A0G2JMS6 1433 aa28.58■■■□□ 2.17
CTSF-201ENST00000310325 PXDNLA1KZ92 1463 aa28.58■■■□□ 2.17
CTSF-201ENST00000310325 HDGFL1Q5TGJ6 251 aa28.57■■■□□ 2.16
CTSF-201ENST00000310325 EIF4A1P60842 406 aaKnown RBP28.56■■■□□ 2.16
CTSF-201ENST00000310325 TEFQ10587 303 aa28.56■■■□□ 2.16
CTSF-201ENST00000310325 USP35Q9P2H5 1018 aa28.56■■■□□ 2.16
CTSF-201ENST00000310325 HOXB7P09629 217 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 C1orf141Q5JVX7 400 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 CADPS2Q86UW7 1296 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 ERBB3P21860 1342 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 HMMRO75330 724 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 LMTK3Q96Q04 1460 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 MPRIPQ6WCQ1 1025 aa28.53■■■□□ 2.16
CTSF-201ENST00000310325 ZC3H6P61129 1189 aaKnown RBP28.53■■■□□ 2.16
CTSF-201ENST00000310325 RNMTO43148 476 aaKnown RBP28.52■■■□□ 2.16
CTSF-201ENST00000310325 PLEKHM2Q8IWE5 1019 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 NPHP3Q7Z494 1330 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 GNAI2P04899 355 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 CHMP4AQ9BY43 222 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 SIPA1L3O60292 1781 aaPredicted RBP28.51■■■□□ 2.15
CTSF-201ENST00000310325 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 GNAI3P08754 354 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 HSPA2P54652 639 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
CTSF-201ENST00000310325 ADAMTS7Q9UKP4 1686 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 CRYBG1Q9Y4K1 1723 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
CTSF-201ENST00000310325 COL18A1P39060 1754 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 TNS3Q68CZ2 1445 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 KCNQ3O43525 872 aa28.48■■■□□ 2.15
CTSF-201ENST00000310325 TBC1D2Q9BYX2 928 aa28.47■■■□□ 2.15
CTSF-201ENST00000310325 PHAXQ9H814 394 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 GSPT1P15170 499 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 EIF2S2P20042 333 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 ABCC6O95255 1503 aa28.46■■■□□ 2.15
CTSF-201ENST00000310325 RBM25P49756 843 aaKnown RBP28.46■■■□□ 2.15
CTSF-201ENST00000310325 TTC22Q5TAA0 569 aa28.45■■■□□ 2.15
CTSF-201ENST00000310325 TBC1D9Q6ZT07 1266 aa28.45■■■□□ 2.15
CTSF-201ENST00000310325 C16orf71Q8IYS4 520 aaPredicted RBP28.45■■■□□ 2.14
CTSF-201ENST00000310325 CDC45O75419 566 aa28.44■■■□□ 2.14
CTSF-201ENST00000310325 NFKBIBQ15653 356 aa28.43■■■□□ 2.14
CTSF-201ENST00000310325 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
CTSF-201ENST00000310325 SMARCA5O60264 1052 aaPredicted RBP28.43■■■□□ 2.14
CTSF-201ENST00000310325 APBB1O00213 710 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 RAPGEF4Q8WZA2 1011 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 NLRP2Q9NX02 1062 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 SPATA31A3Q5VYP0 1347 aa28.41■■■□□ 2.14
CTSF-201ENST00000310325 OTUD7AQ8TE49 926 aaPredicted RBP28.41■■■□□ 2.14
CTSF-201ENST00000310325 SCN11AQ9UI33 1791 aa28.41■■■□□ 2.14
CTSF-201ENST00000310325 ATP8B2P98198 1209 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 STRCQ7RTU9 1775 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 HEG1Q9ULI3 1381 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 USP44Q9H0E7 712 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 CABLES1Q8TDN4 633 aa28.39■■■□□ 2.14
CTSF-201ENST00000310325 SRCIN1Q9C0H9 1055 aa28.38■■■□□ 2.13
CTSF-201ENST00000310325 LRRFIP2Q9Y608 721 aaKnown RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 EIF5BO60841 1220 aaKnown RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 UBTFL1P0CB47 393 aaPredicted RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 TATP17735 454 aaPredicted RBP28.37■■■□□ 2.13
CTSF-201ENST00000310325 DEKP35659 375 aaKnown RBP28.37■■■□□ 2.13
CTSF-201ENST00000310325 PNMA6EA0A0J9YXQ4 647 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 MEGF6O75095 1541 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 PLEKHG2Q9H7P9 1386 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 KDM4FA0A1W2PPD8 638 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 GIGYF1O75420 1035 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 SLKQ9H2G2 1235 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 DNAAF4Q8WXU2 420 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 EXOC6BQ9Y2D4 811 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 CPDO75976 1380 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.35■■■□□ 2.13
CTSF-201ENST00000310325 CSB-PGBD3P0DP91 1061 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 ANTXR1Q9H6X2 564 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 PI4KAP2A4QPH2 592 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 PI4KAP1Q8N8J0 262 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 OSBPL3Q9H4L5 887 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 KDM6AO15550 1401 aaPredicted RBP28.33■■■□□ 2.13
CTSF-201ENST00000310325 IBTKQ9P2D0 1353 aaPredicted RBP28.33■■■□□ 2.13
CTSF-201ENST00000310325 PKD1L3Q7Z443 1732 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 CHRNA2Q15822 529 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 ADCY9O60503 1353 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 ANXA1P04083 346 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 BEND3Q5T5X7 828 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 LRRCC1Q9C099 1032 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 PHKG2P15735 406 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 HSCBQ8IWL3 235 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 SDSP20132 328 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 PDE1AP54750 535 aa28.3■■■□□ 2.12
CTSF-201ENST00000310325 SLC52A2Q9HAB3 445 aa28.3■■■□□ 2.12
CTSF-201ENST00000310325 SSH3Q8TE77 659 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 SNX21Q969T3 373 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 IFNL2Q8IZJ0 200 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms