RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 CACNA1FO60840 1977 aa24.45■■□□□ 1.5
LRFN4-201ENST00000309602 EIF5BO60841 1220 aaKnown RBP24.45■■□□□ 1.5
LRFN4-201ENST00000309602 EXOC6BQ9Y2D4 811 aa24.45■■□□□ 1.5
LRFN4-201ENST00000309602 K7ELQ4 463 aaPredicted RBP24.44■■□□□ 1.5
LRFN4-201ENST00000309602 KCNH5Q8NCM2 988 aa24.44■■□□□ 1.5
LRFN4-201ENST00000309602 USP26Q9BXU7 913 aa24.44■■□□□ 1.5
LRFN4-201ENST00000309602 HDGFL1Q5TGJ6 251 aa24.44■■□□□ 1.5
LRFN4-201ENST00000309602 LGR6Q9HBX8 967 aa24.43■■□□□ 1.5
LRFN4-201ENST00000309602 PNMA6EA0A0J9YXQ4 647 aa24.43■■□□□ 1.5
LRFN4-201ENST00000309602 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
LRFN4-201ENST00000309602 PDE1AP54750 535 aa24.42■■□□□ 1.5
LRFN4-201ENST00000309602 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
LRFN4-201ENST00000309602 OSBPL3Q9H4L5 887 aa24.42■■□□□ 1.5
LRFN4-201ENST00000309602 PHAXQ9H814 394 aaKnown RBP24.42■■□□□ 1.5
LRFN4-201ENST00000309602 CIZ1Q9ULV3 898 aaPredicted RBP24.42■■□□□ 1.5
LRFN4-201ENST00000309602 RGPD2P0DJD1 1756 aa24.42■■□□□ 1.5
LRFN4-201ENST00000309602 PXDNLA1KZ92 1463 aa24.41■■□□□ 1.5
LRFN4-201ENST00000309602 ATP8B2P98198 1209 aa24.41■■□□□ 1.5
LRFN4-201ENST00000309602 ORAI2Q96SN7 254 aa24.41■■□□□ 1.5
LRFN4-201ENST00000309602 NPHP4O75161 1426 aaPredicted RBP24.41■■□□□ 1.5
LRFN4-201ENST00000309602 N4BP2Q86UW6 1770 aaPredicted RBP24.41■■□□□ 1.5
LRFN4-201ENST00000309602 FOXD4L1Q9NU39 408 aa24.41■■□□□ 1.5
LRFN4-201ENST00000309602 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
LRFN4-201ENST00000309602 CASC1Q6TDU7 716 aa24.4■■□□□ 1.5
LRFN4-201ENST00000309602 PHRF1Q9P1Y6 1649 aaKnown RBP24.4■■□□□ 1.5
LRFN4-201ENST00000309602 LRRFIP2Q9Y608 721 aaKnown RBP24.4■■□□□ 1.5
LRFN4-201ENST00000309602 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
LRFN4-201ENST00000309602 USP44Q9H0E7 712 aa24.4■■□□□ 1.5
LRFN4-201ENST00000309602 SALL3Q9BXA9 1300 aa24.39■■□□□ 1.49
LRFN4-201ENST00000309602 HSP90AA1P07900 732 aaKnown RBP24.39■■□□□ 1.49
LRFN4-201ENST00000309602 RABEP1Q15276 862 aa24.39■■□□□ 1.49
LRFN4-201ENST00000309602 TNPO1Q92973 898 aaKnown RBP24.38■■□□□ 1.49
LRFN4-201ENST00000309602 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
LRFN4-201ENST00000309602 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
LRFN4-201ENST00000309602 KCNQ3O43525 872 aa24.37■■□□□ 1.49
LRFN4-201ENST00000309602 GCP02774 474 aa24.37■■□□□ 1.49
LRFN4-201ENST00000309602 EIF2S2P20042 333 aaKnown RBP24.37■■□□□ 1.49
LRFN4-201ENST00000309602 RAB3GAP1Q15042 981 aa24.37■■□□□ 1.49
LRFN4-201ENST00000309602 TSHZ3Q63HK5 1081 aa24.37■■□□□ 1.49
LRFN4-201ENST00000309602 ZNF530Q6P9A1 599 aaPredicted RBP24.36■■□□□ 1.49
LRFN4-201ENST00000309602 IBTKQ9P2D0 1353 aaPredicted RBP24.36■■□□□ 1.49
LRFN4-201ENST00000309602 KDM3BQ7LBC6 1761 aa24.36■■□□□ 1.49
LRFN4-201ENST00000309602 TRAK2O60296 914 aa24.36■■□□□ 1.49
LRFN4-201ENST00000309602 ARHGEF25Q86VW2 580 aa24.36■■□□□ 1.49
LRFN4-201ENST00000309602 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
LRFN4-201ENST00000309602 LMO7Q8WWI1 1683 aa24.35■■□□□ 1.49
LRFN4-201ENST00000309602 DDX11L8A8MPP1 907 aa24.35■■□□□ 1.49
LRFN4-201ENST00000309602 UBTFL1P0CB47 393 aaPredicted RBP24.35■■□□□ 1.49
LRFN4-201ENST00000309602 SLIT3O75094 1523 aa24.34■■□□□ 1.49
LRFN4-201ENST00000309602 PLEKHO1Q53GL0 409 aaPredicted RBP24.34■■□□□ 1.49
LRFN4-201ENST00000309602 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
LRFN4-201ENST00000309602 HOXB7P09629 217 aa24.33■■□□□ 1.49
LRFN4-201ENST00000309602 CHPF2Q9P2E5 772 aa24.33■■□□□ 1.49
LRFN4-201ENST00000309602 ERC2O15083 957 aa24.33■■□□□ 1.48
LRFN4-201ENST00000309602 REC8O95072 547 aa24.33■■□□□ 1.48
LRFN4-201ENST00000309602 MX1P20591 662 aa24.33■■□□□ 1.48
LRFN4-201ENST00000309602 TEFQ10587 303 aa24.33■■□□□ 1.48
LRFN4-201ENST00000309602 GZF1Q9H116 711 aaPredicted RBP24.33■■□□□ 1.48
LRFN4-201ENST00000309602 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.48
LRFN4-201ENST00000309602 LMOD2Q6P5Q4 547 aa24.32■■□□□ 1.48
LRFN4-201ENST00000309602 PXDNQ92626 1479 aa24.32■■□□□ 1.48
LRFN4-201ENST00000309602 SRCIN1Q9C0H9 1055 aa24.32■■□□□ 1.48
LRFN4-201ENST00000309602 NCAPD2Q15021 1401 aa24.32■■□□□ 1.48
LRFN4-201ENST00000309602 BTBD11A6QL63 1104 aa24.31■■□□□ 1.48
LRFN4-201ENST00000309602 RTN4Q9NQC3 1192 aaKnown RBP24.31■■□□□ 1.48
LRFN4-201ENST00000309602 TUBGCP6Q96RT7 1819 aa24.31■■□□□ 1.48
LRFN4-201ENST00000309602 SSH3Q8TE77 659 aa24.3■■□□□ 1.48
LRFN4-201ENST00000309602 ANKRD24Q8TF21 1146 aa24.3■■□□□ 1.48
LRFN4-201ENST00000309602 KDM4FA0A1W2PPD8 638 aa24.3■■□□□ 1.48
LRFN4-201ENST00000309602 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
LRFN4-201ENST00000309602 RNMTO43148 476 aaKnown RBP24.29■■□□□ 1.48
LRFN4-201ENST00000309602 ANXA1P04083 346 aa24.29■■□□□ 1.48
LRFN4-201ENST00000309602 GBP4Q96PP9 640 aa24.29■■□□□ 1.48
LRFN4-201ENST00000309602 L1TD1Q5T7N2 865 aaKnown RBP24.28■■□□□ 1.48
LRFN4-201ENST00000309602 STAP2Q9UGK3 403 aa24.28■■□□□ 1.48
LRFN4-201ENST00000309602 TRPM3Q9HCF6 1732 aaPredicted RBP24.28■■□□□ 1.48
LRFN4-201ENST00000309602 PI4KAP2A4QPH2 592 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 PPP1R42Q7Z4L9 355 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 PI4KAP1Q8N8J0 262 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 AXIN2Q9Y2T1 843 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 C1orf141Q5JVX7 400 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 BEND3Q5T5X7 828 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 KRT28Q7Z3Y7 464 aa24.27■■□□□ 1.48
LRFN4-201ENST00000309602 SSFA2P28290 1259 aa24.26■■□□□ 1.47
LRFN4-201ENST00000309602 POLA2Q14181 598 aa24.26■■□□□ 1.47
LRFN4-201ENST00000309602 NBPF7P0C2Y1 421 aaPredicted RBP24.26■■□□□ 1.47
LRFN4-201ENST00000309602 PROSER2Q86WR7 435 aaPredicted RBP24.26■■□□□ 1.47
LRFN4-201ENST00000309602 FSD2A1L4K1 749 aa24.25■■□□□ 1.47
LRFN4-201ENST00000309602 ESYT1Q9BSJ8 1104 aa24.25■■□□□ 1.47
LRFN4-201ENST00000309602 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
LRFN4-201ENST00000309602 IL1RAPL2Q9NP60 686 aa24.25■■□□□ 1.47
LRFN4-201ENST00000309602 ADCY9O60503 1353 aa24.25■■□□□ 1.47
LRFN4-201ENST00000309602 RILPL2Q969X0 211 aa24.24■■□□□ 1.47
LRFN4-201ENST00000309602 C1orf167Q5SNV9 1468 aa24.24■■□□□ 1.47
LRFN4-201ENST00000309602 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
LRFN4-201ENST00000309602 GOLGA6L3A6NEY3 463 aa24.23■■□□□ 1.47
LRFN4-201ENST00000309602 TRIM6-TRIM34B2RNG4 842 aa24.23■■□□□ 1.47
LRFN4-201ENST00000309602 ST18O60284 1047 aa24.23■■□□□ 1.47
LRFN4-201ENST00000309602 ARXQ96QS3 562 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms