RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ADGRB1O14514 1584 aa17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 FOXO3O43524 673 aa17.41■□□□□ 0.38
SCUBE2-201ENST00000309263 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 ADGRB2O60241 1585 aa17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 CNPY2Q9Y2B0 182 aa17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
SCUBE2-201ENST00000309263 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 ADCY5O95622 1261 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 MX1P20591 662 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 ESYT1Q9BSJ8 1104 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 LRRCC1Q9C099 1032 aa17.39■□□□□ 0.37
SCUBE2-201ENST00000309263 DYNC1I1O14576 645 aa17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 PHF14O94880 888 aa17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 CPA1P15085 419 aa17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
SCUBE2-201ENST00000309263 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 MED14O60244 1454 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 GNAI2P04899 355 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 BRD1O95696 1058 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 C3P01024 1663 aa17.37■□□□□ 0.37
SCUBE2-201ENST00000309263 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 IGSF3O75054 1194 aa17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 PNMA6EA0A0J9YXQ4 647 aa17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
SCUBE2-201ENST00000309263 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
SCUBE2-201ENST00000309263 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
SCUBE2-201ENST00000309263 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
SCUBE2-201ENST00000309263 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
SCUBE2-201ENST00000309263 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
SCUBE2-201ENST00000309263 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.37
SCUBE2-201ENST00000309263 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.37
SCUBE2-201ENST00000309263 MCM5P33992 734 aa17.33■□□□□ 0.37
SCUBE2-201ENST00000309263 MCM2P49736 904 aa17.33■□□□□ 0.37
SCUBE2-201ENST00000309263 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.37
SCUBE2-201ENST00000309263 CHMLP26374 656 aa17.33■□□□□ 0.36
SCUBE2-201ENST00000309263 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
SCUBE2-201ENST00000309263 SMC3Q9UQE7 1217 aa17.33■□□□□ 0.36
SCUBE2-201ENST00000309263 PIK3R4Q99570 1358 aa17.33■□□□□ 0.36
SCUBE2-201ENST00000309263 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.36
SCUBE2-201ENST00000309263 KCNJ4P48050 445 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 CAMK4Q16566 473 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 FERMT3Q86UX7 667 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 TERF1P54274 439 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 PPP4R3BQ5MIZ7 849 aa17.32■□□□□ 0.36
SCUBE2-201ENST00000309263 IL25Q9H293 177 aa17.31■□□□□ 0.36
SCUBE2-201ENST00000309263 TMEM2Q9UHN6 1383 aa17.31■□□□□ 0.36
SCUBE2-201ENST00000309263 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
SCUBE2-201ENST00000309263 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SCUBE2-201ENST00000309263 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
SCUBE2-201ENST00000309263 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
SCUBE2-201ENST00000309263 PTPRMP28827 1452 aa17.3■□□□□ 0.36
SCUBE2-201ENST00000309263 MTERF4Q7Z6M4 381 aaKnown RBP17.3■□□□□ 0.36
SCUBE2-201ENST00000309263 CHL1O00533 1208 aa17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 PPLO60437 1756 aa17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 CCDC183Q5T5S1 534 aa17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
SCUBE2-201ENST00000309263 PTPRCP08575 1304 aa17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 CASTP20810 708 aaKnown RBP17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 DNM1Q05193 864 aaKnown RBP17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 LTKP29376 864 aa17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
SCUBE2-201ENST00000309263 GOLGA6L4A6NEF3 574 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms