RNA–Protein interactions for RNA: ENST00000305869.3

CCL11-201, Transcript of C-C motif chemokine ligand 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL11, Length 1,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL11-201ENST00000305869 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
CCL11-201ENST00000305869 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
CCL11-201ENST00000305869 NBPF8Q3BBV2 869 aa13.47□□□□□ -0.25
CCL11-201ENST00000305869 SAMD7Q7Z3H4 446 aa13.47□□□□□ -0.25
CCL11-201ENST00000305869 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
CCL11-201ENST00000305869 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
CCL11-201ENST00000305869 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.25
CCL11-201ENST00000305869 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
CCL11-201ENST00000305869 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
CCL11-201ENST00000305869 FCHSD2O94868 740 aa13.45□□□□□ -0.26
CCL11-201ENST00000305869 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
CCL11-201ENST00000305869 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
CCL11-201ENST00000305869 EYA1Q99502 592 aa13.45□□□□□ -0.26
CCL11-201ENST00000305869 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
CCL11-201ENST00000305869 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
CCL11-201ENST00000305869 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
CCL11-201ENST00000305869 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
CCL11-201ENST00000305869 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
CCL11-201ENST00000305869 LRP6O75581 1613 aa13.43□□□□□ -0.26
CCL11-201ENST00000305869 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
CCL11-201ENST00000305869 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
CCL11-201ENST00000305869 PPP4CP60510 307 aa13.42□□□□□ -0.26
CCL11-201ENST00000305869 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
CCL11-201ENST00000305869 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
CCL11-201ENST00000305869 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
CCL11-201ENST00000305869 ACEP12821 1306 aa13.41□□□□□ -0.26
CCL11-201ENST00000305869 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
CCL11-201ENST00000305869 AFF2P51816 1311 aa13.4□□□□□ -0.26
CCL11-201ENST00000305869 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
CCL11-201ENST00000305869 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
CCL11-201ENST00000305869 TMF1P82094 1093 aa13.39□□□□□ -0.27
CCL11-201ENST00000305869 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
CCL11-201ENST00000305869 USP47Q96K76 1375 aa13.39□□□□□ -0.27
CCL11-201ENST00000305869 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
CCL11-201ENST00000305869 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
CCL11-201ENST00000305869 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
CCL11-201ENST00000305869 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
CCL11-201ENST00000305869 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
CCL11-201ENST00000305869 RXRBP28702 533 aa13.37□□□□□ -0.27
CCL11-201ENST00000305869 HIC1Q14526 733 aa13.37□□□□□ -0.27
CCL11-201ENST00000305869 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
CCL11-201ENST00000305869 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
CCL11-201ENST00000305869 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
CCL11-201ENST00000305869 USP21Q9UK80 565 aa13.37□□□□□ -0.27
CCL11-201ENST00000305869 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
CCL11-201ENST00000305869 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
CCL11-201ENST00000305869 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
CCL11-201ENST00000305869 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
CCL11-201ENST00000305869 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
CCL11-201ENST00000305869 USP6P35125 1406 aa13.36□□□□□ -0.27
CCL11-201ENST00000305869 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
CCL11-201ENST00000305869 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
CCL11-201ENST00000305869 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
CCL11-201ENST00000305869 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
CCL11-201ENST00000305869 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.35□□□□□ -0.27
CCL11-201ENST00000305869 NWD2Q9ULI1 1742 aa13.35□□□□□ -0.27
CCL11-201ENST00000305869 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
CCL11-201ENST00000305869 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
CCL11-201ENST00000305869 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
CCL11-201ENST00000305869 AKAP12Q02952 1782 aa13.33□□□□□ -0.28
CCL11-201ENST00000305869 DNAJB2P25686 324 aa13.33□□□□□ -0.28
CCL11-201ENST00000305869 EIF4G2P78344 907 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCL11-201ENST00000305869 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
CCL11-201ENST00000305869 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
CCL11-201ENST00000305869 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
CCL11-201ENST00000305869 A0A0G2JS52 829 aa13.32□□□□□ -0.28
CCL11-201ENST00000305869 GPR37O15354 613 aa13.32□□□□□ -0.28
CCL11-201ENST00000305869 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
CCL11-201ENST00000305869 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
CCL11-201ENST00000305869 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
CCL11-201ENST00000305869 CPSF1Q10570 1443 aaKnown RBP13.31□□□□□ -0.28
CCL11-201ENST00000305869 SLIT2O94813 1529 aa13.31□□□□□ -0.28
CCL11-201ENST00000305869 KCNC4Q03721 635 aa13.31□□□□□ -0.28
CCL11-201ENST00000305869 TESK2Q96S53 571 aa13.31□□□□□ -0.28
CCL11-201ENST00000305869 GNPATO15228 680 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 OATP04181 439 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 TMEM134Q9H6X4 195 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 PHRF1Q9P1Y6 1649 aaKnown RBP13.3□□□□□ -0.28
CCL11-201ENST00000305869 USP19O94966 1318 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 ATRNO75882 1429 aa13.3□□□□□ -0.28
CCL11-201ENST00000305869 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
CCL11-201ENST00000305869 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 RNF40O75150 1001 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 RGS20O76081 388 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
CCL11-201ENST00000305869 RCCD1A6NED2 376 aa13.28□□□□□ -0.28
CCL11-201ENST00000305869 CPDO75976 1380 aa13.28□□□□□ -0.28
CCL11-201ENST00000305869 VPS72Q15906 364 aa13.27□□□□□ -0.29
CCL11-201ENST00000305869 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
CCL11-201ENST00000305869 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.29
CCL11-201ENST00000305869 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
CCL11-201ENST00000305869 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
CCL11-201ENST00000305869 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.29
CCL11-201ENST00000305869 SSH2Q76I76 1423 aa13.27□□□□□ -0.29
CCL11-201ENST00000305869 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms