RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 KDM3BQ7LBC6 1761 aa8.24□□□□□ -1.09
USP47-201ENST00000305481 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
USP47-201ENST00000305481 EIF4A1P60842 406 aaKnown RBP8.24□□□□□ -1.09
USP47-201ENST00000305481 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
USP47-201ENST00000305481 SOS1Q07889 1333 aaPredicted RBP8.24□□□□□ -1.09
USP47-201ENST00000305481 RNMTO43148 476 aaKnown RBP8.23□□□□□ -1.09
USP47-201ENST00000305481 FLIIQ13045 1269 aa8.23□□□□□ -1.09
USP47-201ENST00000305481 STK31Q9BXU1 1019 aa8.23□□□□□ -1.09
USP47-201ENST00000305481 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
USP47-201ENST00000305481 ANKRD45Q5TZF3 282 aa8.23□□□□□ -1.09
USP47-201ENST00000305481 CEP85Q6P2H3 762 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 SLC4A10Q6U841 1118 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 ANKRD44Q8N8A2 993 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 SLAIN2Q9P270 581 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 C1orf141Q5JVX7 400 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 ADAMTS7Q9UKP4 1686 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 CCT4P50991 539 aaKnown RBP8.22□□□□□ -1.09
USP47-201ENST00000305481 TEFQ10587 303 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 HDGFL1Q5TGJ6 251 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 PHAXQ9H814 394 aaKnown RBP8.22□□□□□ -1.09
USP47-201ENST00000305481 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
USP47-201ENST00000305481 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.09
USP47-201ENST00000305481 FKBP5Q13451 457 aaPredicted RBP8.21□□□□□ -1.09
USP47-201ENST00000305481 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.09
USP47-201ENST00000305481 MEGF6O75095 1541 aa8.21□□□□□ -1.09
USP47-201ENST00000305481 CPDO75976 1380 aa8.21□□□□□ -1.09
USP47-201ENST00000305481 RPAP2Q8IXW5 612 aaPredicted RBP8.21□□□□□ -1.1
USP47-201ENST00000305481 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
USP47-201ENST00000305481 CACNA1FO60840 1977 aa8.21□□□□□ -1.1
USP47-201ENST00000305481 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
USP47-201ENST00000305481 SIPA1L3O60292 1781 aaPredicted RBP8.21□□□□□ -1.1
USP47-201ENST00000305481 HEG1Q9ULI3 1381 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 HOXB7P09629 217 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 EIF2S2P20042 333 aaKnown RBP8.2□□□□□ -1.1
USP47-201ENST00000305481 SLC4A3P48751 1232 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 RAPGEF4Q8WZA2 1011 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 CHPF2Q9P2E5 772 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 ABCC6O95255 1503 aa8.2□□□□□ -1.1
USP47-201ENST00000305481 KDM6AO15550 1401 aaPredicted RBP8.19□□□□□ -1.1
USP47-201ENST00000305481 PRAMEF22A3QJZ6 481 aa8.19□□□□□ -1.1
USP47-201ENST00000305481 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
USP47-201ENST00000305481 PHKG2P15735 406 aa8.19□□□□□ -1.1
USP47-201ENST00000305481 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
USP47-201ENST00000305481 ANXA1P04083 346 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 BMP2KLQ5H9B9 411 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 C16orf71Q8IYS4 520 aaPredicted RBP8.18□□□□□ -1.1
USP47-201ENST00000305481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■■■□□ 14.9
USP47-201ENST00000305481 N4BP2Q86UW6 1770 aaPredicted RBP8.18□□□□□ -1.1
USP47-201ENST00000305481 PXDNLA1KZ92 1463 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
USP47-201ENST00000305481 USP44Q9H0E7 712 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 CYP27B1O15528 508 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
USP47-201ENST00000305481 GNAI2P04899 355 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 PROSER3Q2NL68 480 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 OTUD7AQ8TE49 926 aaPredicted RBP8.17□□□□□ -1.1
USP47-201ENST00000305481 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 SCN11AQ9UI33 1791 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 NFATC2IPQ8NCF5 419 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 SLC52A2Q9HAB3 445 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
USP47-201ENST00000305481 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 ADCY9O60503 1353 aa8.17□□□□□ -1.1
USP47-201ENST00000305481 PKD1L3Q7Z443 1732 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 PNMA6EA0A0J9YXQ4 647 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 PI4KAP2A4QPH2 592 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 GSPT1P15170 499 aaKnown RBP8.16□□□□□ -1.1
USP47-201ENST00000305481 IFNL2Q8IZJ0 200 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 PI4KAP1Q8N8J0 262 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 GNAI3P08754 354 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 BEND3Q5T5X7 828 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 ZNF790Q6PG37 636 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
USP47-201ENST00000305481 PLEKHG2Q9H7P9 1386 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 WDR17Q8IZU2 1322 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 APBB1O00213 710 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 MFAP1P55081 439 aaKnown RBP8.16□□□□□ -1.1
USP47-201ENST00000305481 ATP8B2P98198 1209 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 PDIA6Q15084 440 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 UPF2Q9HAU5 1272 aaKnown RBP8.16□□□□□ -1.1
USP47-201ENST00000305481 LRRFIP2Q9Y608 721 aaKnown RBP8.16□□□□□ -1.1
USP47-201ENST00000305481 ABCA3Q99758 1704 aa8.16□□□□□ -1.1
USP47-201ENST00000305481 COL5A2P05997 1499 aaPredicted RBP8.15□□□□□ -1.1
USP47-201ENST00000305481 HMMRO75330 724 aa8.15□□□□□ -1.1
USP47-201ENST00000305481 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
USP47-201ENST00000305481 NHSL1Q5SYE7 1610 aa8.15□□□□□ -1.1
USP47-201ENST00000305481 MRC1P22897 1456 aa8.15□□□□□ -1.11
USP47-201ENST00000305481 NBPF7P0C2Y1 421 aaPredicted RBP8.15□□□□□ -1.11
USP47-201ENST00000305481 DCAF5Q96JK2 942 aa8.15□□□□□ -1.11
USP47-201ENST00000305481 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.11
USP47-201ENST00000305481 C22orf23Q9BZE7 217 aa8.15□□□□□ -1.11
USP47-201ENST00000305481 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.11
USP47-201ENST00000305481 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
USP47-201ENST00000305481 EXOC6BQ9Y2D4 811 aa8.14□□□□□ -1.11
USP47-201ENST00000305481 C5P01031 1676 aa8.14□□□□□ -1.11
USP47-201ENST00000305481 UBTFL1P0CB47 393 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms