RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CAMTA1Q9Y6Y1 1673 aa17.83■□□□□ 0.44
RAB40A-201ENST00000304236 ZBTB7BO15156 539 aaPredicted RBP17.82■□□□□ 0.44
RAB40A-201ENST00000304236 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
RAB40A-201ENST00000304236 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 OVOS2A0A0J9YW53 1432 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 OVOS2Q6IE36 1432 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 ABCC4O15439 1325 aa17.82■□□□□ 0.44
RAB40A-201ENST00000304236 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
RAB40A-201ENST00000304236 TSPYL6Q8N831 410 aa17.8■□□□□ 0.44
RAB40A-201ENST00000304236 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
RAB40A-201ENST00000304236 EN1Q05925 392 aaPredicted RBP17.8■□□□□ 0.44
RAB40A-201ENST00000304236 EIF4A2Q14240 407 aaKnown RBP17.8■□□□□ 0.44
RAB40A-201ENST00000304236 GSE1Q14687 1217 aa17.8■□□□□ 0.44
RAB40A-201ENST00000304236 USP31Q70CQ4 1352 aa17.8■□□□□ 0.44
RAB40A-201ENST00000304236 LMO7Q8WWI1 1683 aa17.79■□□□□ 0.44
RAB40A-201ENST00000304236 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
RAB40A-201ENST00000304236 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
RAB40A-201ENST00000304236 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
RAB40A-201ENST00000304236 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
RAB40A-201ENST00000304236 SLIT3O75094 1523 aa17.77■□□□□ 0.44
RAB40A-201ENST00000304236 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
RAB40A-201ENST00000304236 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.44
RAB40A-201ENST00000304236 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
RAB40A-201ENST00000304236 TRIM37O94972 964 aa17.77■□□□□ 0.43
RAB40A-201ENST00000304236 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.43
RAB40A-201ENST00000304236 DISP2A7MBM2 1401 aa17.76■□□□□ 0.43
RAB40A-201ENST00000304236 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
RAB40A-201ENST00000304236 CRB1P82279 1406 aa17.76■□□□□ 0.43
RAB40A-201ENST00000304236 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
RAB40A-201ENST00000304236 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
RAB40A-201ENST00000304236 CHL1O00533 1208 aa17.74■□□□□ 0.43
RAB40A-201ENST00000304236 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
RAB40A-201ENST00000304236 BMP2KLQ5H9B9 411 aa17.74■□□□□ 0.43
RAB40A-201ENST00000304236 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
RAB40A-201ENST00000304236 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
RAB40A-201ENST00000304236 APBA3O96018 575 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
RAB40A-201ENST00000304236 ARHGEF25Q86VW2 580 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 ANTXR1Q9H6X2 564 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
RAB40A-201ENST00000304236 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
RAB40A-201ENST00000304236 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
RAB40A-201ENST00000304236 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
RAB40A-201ENST00000304236 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
RAB40A-201ENST00000304236 SOX12O15370 315 aa17.71■□□□□ 0.43
RAB40A-201ENST00000304236 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
RAB40A-201ENST00000304236 AXIN2Q9Y2T1 843 aa17.71■□□□□ 0.43
RAB40A-201ENST00000304236 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
RAB40A-201ENST00000304236 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
RAB40A-201ENST00000304236 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
RAB40A-201ENST00000304236 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
RAB40A-201ENST00000304236 SLKQ9H2G2 1235 aaPredicted RBP17.7■□□□□ 0.42
RAB40A-201ENST00000304236 FLT4P35916 1363 aa17.7■□□□□ 0.42
RAB40A-201ENST00000304236 PTPRCP08575 1304 aa17.69■□□□□ 0.42
RAB40A-201ENST00000304236 C1orf115Q9H7X2 142 aa17.69■□□□□ 0.42
RAB40A-201ENST00000304236 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
RAB40A-201ENST00000304236 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
RAB40A-201ENST00000304236 DDB1Q16531 1140 aa17.68■□□□□ 0.42
RAB40A-201ENST00000304236 SIRT2Q8IXJ6 389 aa17.68■□□□□ 0.42
RAB40A-201ENST00000304236 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
RAB40A-201ENST00000304236 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
RAB40A-201ENST00000304236 COL18A1P39060 1754 aa17.67■□□□□ 0.42
RAB40A-201ENST00000304236 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
RAB40A-201ENST00000304236 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
RAB40A-201ENST00000304236 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
RAB40A-201ENST00000304236 SNX21Q969T3 373 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 KDRP35968 1356 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 OVOS2A0A0G2JMS6 1433 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 MCM10Q7L590 875 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
RAB40A-201ENST00000304236 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
RAB40A-201ENST00000304236 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
RAB40A-201ENST00000304236 CHMP5Q9NZZ3 219 aa17.65■□□□□ 0.42
RAB40A-201ENST00000304236 LRP5O75197 1615 aa17.65■□□□□ 0.42
RAB40A-201ENST00000304236 NFAT5O94916 1531 aa17.64■□□□□ 0.42
RAB40A-201ENST00000304236 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.42
RAB40A-201ENST00000304236 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
RAB40A-201ENST00000304236 AMPHP49418 695 aa17.64■□□□□ 0.41
RAB40A-201ENST00000304236 NBPF14Q5TI25 921 aa17.64■□□□□ 0.41
RAB40A-201ENST00000304236 ANKRD44Q8N8A2 993 aa17.64■□□□□ 0.41
RAB40A-201ENST00000304236 IGSF1Q8N6C5 1336 aa17.63■□□□□ 0.41
RAB40A-201ENST00000304236 ABCC6O95255 1503 aa17.62■□□□□ 0.41
RAB40A-201ENST00000304236 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
RAB40A-201ENST00000304236 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
RAB40A-201ENST00000304236 CDC45O75419 566 aa17.61■□□□□ 0.41
RAB40A-201ENST00000304236 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
RAB40A-201ENST00000304236 EXOC5O00471 708 aa17.6■□□□□ 0.41
RAB40A-201ENST00000304236 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
RAB40A-201ENST00000304236 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
RAB40A-201ENST00000304236 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
RAB40A-201ENST00000304236 EYA1Q99502 592 aa17.6■□□□□ 0.41
RAB40A-201ENST00000304236 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
RAB40A-201ENST00000304236 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
RAB40A-201ENST00000304236 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms