RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 KIF24Q5T7B8 1368 aa15.68■□□□□ 0.1
TVP23A-201ENST00000299866 FGD1P98174 961 aa15.68■□□□□ 0.1
TVP23A-201ENST00000299866 F6X3S4 739 aa15.67■□□□□ 0.1
TVP23A-201ENST00000299866 CHMLP26374 656 aa15.67■□□□□ 0.1
TVP23A-201ENST00000299866 IL13P35225 146 aa15.67■□□□□ 0.1
TVP23A-201ENST00000299866 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
TVP23A-201ENST00000299866 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
TVP23A-201ENST00000299866 ZCCHC11Q5TAX3 1644 aaKnown RBP15.67■□□□□ 0.1
TVP23A-201ENST00000299866 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
TVP23A-201ENST00000299866 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
TVP23A-201ENST00000299866 UBE2HP62256 183 aa15.66■□□□□ 0.1
TVP23A-201ENST00000299866 ANKRD7Q92527 254 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 OSBPL3Q9H4L5 887 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 PPLO60437 1756 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 ZSCAN22P10073 491 aaPredicted RBP15.65■□□□□ 0.1
TVP23A-201ENST00000299866 ANAPC15P60006 121 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
TVP23A-201ENST00000299866 UNC5CLQ8IV45 518 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
TVP23A-201ENST00000299866 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
TVP23A-201ENST00000299866 CAMSAP1Q5T5Y3 1602 aa15.64■□□□□ 0.09
TVP23A-201ENST00000299866 PTGS1P23219 599 aa15.64■□□□□ 0.09
TVP23A-201ENST00000299866 MCM10Q7L590 875 aa15.64■□□□□ 0.09
TVP23A-201ENST00000299866 MAP4K4O95819 1239 aaPredicted RBP15.64■□□□□ 0.09
TVP23A-201ENST00000299866 RGS12O14924 1447 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 GOLGA6L6A8MZA4 724 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 C16orf45Q96MC5 204 aaPredicted RBP15.63■□□□□ 0.09
TVP23A-201ENST00000299866 IL25Q9H293 177 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 MIS18AQ9NYP9 233 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
TVP23A-201ENST00000299866 RPAP1Q9BWH6 1393 aaPredicted RBP15.63■□□□□ 0.09
TVP23A-201ENST00000299866 STX6O43752 255 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 SYT1P21579 422 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 NAA30Q147X3 362 aaPredicted RBP15.63■□□□□ 0.09
TVP23A-201ENST00000299866 DRC7Q8IY82 874 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 LRRCC1Q9C099 1032 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 TCHHQ07283 1943 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 YEATS2Q9ULM3 1422 aa15.63■□□□□ 0.09
TVP23A-201ENST00000299866 G2E3Q7L622 706 aa15.62■□□□□ 0.09
TVP23A-201ENST00000299866 NME9Q86XW9 330 aa15.62■□□□□ 0.09
TVP23A-201ENST00000299866 DNM1Q05193 864 aaKnown RBP15.62■□□□□ 0.09
TVP23A-201ENST00000299866 NCBP1Q09161 790 aaKnown RBP15.62■□□□□ 0.09
TVP23A-201ENST00000299866 SMC3Q9UQE7 1217 aa15.62■□□□□ 0.09
TVP23A-201ENST00000299866 CTIFO43310 598 aaKnown RBP15.61■□□□□ 0.09
TVP23A-201ENST00000299866 F13A1P00488 732 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 LRMPQ12912 555 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 IDI1Q13907 227 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 FUCA2Q9BTY2 467 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 YTHDC2Q9H6S0 1430 aaKnown RBP15.61■□□□□ 0.09
TVP23A-201ENST00000299866 TPM3P06753 285 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 OGFRQ9NZT2 677 aa15.61■□□□□ 0.09
TVP23A-201ENST00000299866 CPA1P15085 419 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 CAMK4Q16566 473 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 ABCC3O15438 1527 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 GNAI2P04899 355 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 AK2P54819 239 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 CCDC186Q7Z3E2 898 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 FEZ1Q99689 392 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 IL1RAPL2Q9NP60 686 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 PTPRCP08575 1304 aa15.6■□□□□ 0.09
TVP23A-201ENST00000299866 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
TVP23A-201ENST00000299866 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
TVP23A-201ENST00000299866 ZBTB22O15209 634 aa15.59■□□□□ 0.09
TVP23A-201ENST00000299866 CCDC192P0DO97 292 aa15.59■□□□□ 0.09
TVP23A-201ENST00000299866 LUZP1Q86V48 1076 aa15.59■□□□□ 0.09
TVP23A-201ENST00000299866 ZNF592Q92610 1267 aa15.59■□□□□ 0.09
TVP23A-201ENST00000299866 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.09
TVP23A-201ENST00000299866 NRBP1Q9UHY1 535 aa15.58■□□□□ 0.09
TVP23A-201ENST00000299866 TNNT1P13805 278 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 SULT6B1Q6IMI4 303 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 ATP6V1DQ9Y5K8 247 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
TVP23A-201ENST00000299866 HSPA4P34932 840 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 WAPLQ7Z5K2 1190 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
TVP23A-201ENST00000299866 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
TVP23A-201ENST00000299866 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.57■□□□□ 0.08
TVP23A-201ENST00000299866 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
TVP23A-201ENST00000299866 CHL1O00533 1208 aa15.57■□□□□ 0.08
TVP23A-201ENST00000299866 CTNNA3Q9UI47 895 aa15.57■□□□□ 0.08
TVP23A-201ENST00000299866 CKAP2LQ8IYA6 745 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 LARGE1O95461 756 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 DDX54Q8TDD1 881 aaKnown RBP15.56■□□□□ 0.08
TVP23A-201ENST00000299866 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 LIMCH1Q9UPQ0 1083 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 CDC42BPGQ6DT37 1551 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 GJB2P29033 226 aa15.56■□□□□ 0.08
TVP23A-201ENST00000299866 CCT4P50991 539 aaKnown RBP15.55■□□□□ 0.08
TVP23A-201ENST00000299866 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
TVP23A-201ENST00000299866 TRIM5Q9C035 493 aa15.55■□□□□ 0.08
TVP23A-201ENST00000299866 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms