RNA–Protein interactions for RNA: ENST00000297596.2

GEM-201, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GEM, Length 2,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-201ENST00000297596 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
GEM-201ENST00000297596 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
GEM-201ENST00000297596 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
GEM-201ENST00000297596 TMEM63CQ9P1W3 806 aa16.81■□□□□ 0.28
GEM-201ENST00000297596 CUL4AQ13619 759 aa16.8■□□□□ 0.28
GEM-201ENST00000297596 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
GEM-201ENST00000297596 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
GEM-201ENST00000297596 MCCP23508 829 aa16.8■□□□□ 0.28
GEM-201ENST00000297596 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
GEM-201ENST00000297596 SOX12O15370 315 aa16.79■□□□□ 0.28
GEM-201ENST00000297596 BRD1O95696 1058 aa16.79■□□□□ 0.28
GEM-201ENST00000297596 MX1P20591 662 aa16.79■□□□□ 0.28
GEM-201ENST00000297596 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
GEM-201ENST00000297596 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
GEM-201ENST00000297596 RIMS1Q86UR5 1692 aaKnown RBP16.79■□□□□ 0.28
GEM-201ENST00000297596 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
GEM-201ENST00000297596 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 GNAI3P08754 354 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 CHMLP26374 656 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 ANAPC15P60006 121 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 ATP8B2P98198 1209 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
GEM-201ENST00000297596 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
GEM-201ENST00000297596 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
GEM-201ENST00000297596 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 MBD3O95983 291 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
GEM-201ENST00000297596 PNMA6EA0A0J9YXQ4 647 aa16.77■□□□□ 0.28
GEM-201ENST00000297596 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.28
GEM-201ENST00000297596 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.28
GEM-201ENST00000297596 STAP2Q9UGK3 403 aa16.77■□□□□ 0.28
GEM-201ENST00000297596 KDRP35968 1356 aa16.77■□□□□ 0.28
GEM-201ENST00000297596 SYCE3A1L190 88 aa16.77■□□□□ 0.27
GEM-201ENST00000297596 FLIIQ13045 1269 aa16.77■□□□□ 0.27
GEM-201ENST00000297596 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.27
GEM-201ENST00000297596 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
GEM-201ENST00000297596 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 TRIM6-TRIM34B2RNG4 842 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
GEM-201ENST00000297596 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
GEM-201ENST00000297596 SRCIN1Q9C0H9 1055 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
GEM-201ENST00000297596 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.76■□□□□ 0.27
GEM-201ENST00000297596 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
GEM-201ENST00000297596 FLT4P35916 1363 aa16.75■□□□□ 0.27
GEM-201ENST00000297596 ZNF500O60304 480 aaPredicted RBP16.75■□□□□ 0.27
GEM-201ENST00000297596 EYA1Q99502 592 aa16.75■□□□□ 0.27
GEM-201ENST00000297596 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
GEM-201ENST00000297596 TNRQ92752 1358 aa16.74■□□□□ 0.27
GEM-201ENST00000297596 IGSF1Q8N6C5 1336 aa16.74■□□□□ 0.27
GEM-201ENST00000297596 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
GEM-201ENST00000297596 CACNA1FO60840 1977 aa16.74■□□□□ 0.27
GEM-201ENST00000297596 TERF1P54274 439 aa16.74■□□□□ 0.27
GEM-201ENST00000297596 FAM208AQ9UK61 1670 aaKnown RBP16.74■□□□□ 0.27
GEM-201ENST00000297596 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
GEM-201ENST00000297596 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
GEM-201ENST00000297596 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
GEM-201ENST00000297596 AOX1Q06278 1338 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
GEM-201ENST00000297596 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 LRRC37A3O60309 1634 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 AMPHP49418 695 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 ZKSCAN5Q9Y2L8 839 aa16.72■□□□□ 0.27
GEM-201ENST00000297596 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
GEM-201ENST00000297596 MCM5P33992 734 aa16.71■□□□□ 0.27
GEM-201ENST00000297596 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
GEM-201ENST00000297596 GNAT3A8MTJ3 354 aa16.7■□□□□ 0.26
GEM-201ENST00000297596 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
GEM-201ENST00000297596 USP44Q9H0E7 712 aa16.7■□□□□ 0.26
GEM-201ENST00000297596 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
GEM-201ENST00000297596 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
GEM-201ENST00000297596 SYAP1Q96A49 352 aaPredicted RBP16.69■□□□□ 0.26
GEM-201ENST00000297596 TSPY26PQ9H489 355 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 PXDNLA1KZ92 1463 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 HSPA4P34932 840 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
GEM-201ENST00000297596 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
GEM-201ENST00000297596 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
GEM-201ENST00000297596 LTKP29376 864 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 IL25Q9H293 177 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 R3HCC1Q9Y3T6 440 aaKnown RBP16.68■□□□□ 0.26
GEM-201ENST00000297596 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
GEM-201ENST00000297596 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
GEM-201ENST00000297596 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
GEM-201ENST00000297596 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
GEM-201ENST00000297596 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
GEM-201ENST00000297596 GADD45BO75293 160 aaPredicted RBP16.66■□□□□ 0.26
GEM-201ENST00000297596 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms