RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 MRC1P22897 1456 aa31.14■■■□□ 2.57
GBX1-201ENST00000297537 LOC102724428A0A0B4J2F2 783 aa31.13■■■□□ 2.57
GBX1-201ENST00000297537 SIK1P57059 783 aa31.13■■■□□ 2.57
GBX1-201ENST00000297537 PNNQ9H307 717 aaKnown RBP31.12■■■□□ 2.57
GBX1-201ENST00000297537 HMGB2P26583 209 aaKnown RBP31.1■■■□□ 2.57
GBX1-201ENST00000297537 CEMIPQ8WUJ3 1361 aa31.09■■■□□ 2.57
GBX1-201ENST00000297537 VIRMAQ69YN4 1812 aaKnown RBP31.08■■■□□ 2.57
GBX1-201ENST00000297537 SLC4A9Q96Q91 983 aa31.08■■■□□ 2.57
GBX1-201ENST00000297537 PDGFDQ9GZP0 370 aaPredicted RBP31.08■■■□□ 2.57
GBX1-201ENST00000297537 ANP32CO43423 234 aa31.06■■■□□ 2.56
GBX1-201ENST00000297537 HTATSF1O43719 755 aaKnown RBP31.06■■■□□ 2.56
GBX1-201ENST00000297537 NEFMP07197 916 aa31.05■■■□□ 2.56
GBX1-201ENST00000297537 ATP6V1AP38606 617 aa31.05■■■□□ 2.56
GBX1-201ENST00000297537 ITPK1Q13572 414 aa31.05■■■□□ 2.56
GBX1-201ENST00000297537 TAF1LQ8IZX4 1826 aa31.05■■■□□ 2.56
GBX1-201ENST00000297537 ADAMTS8Q9UP79 889 aa31.04■■■□□ 2.56
GBX1-201ENST00000297537 C5P01031 1676 aa31.03■■■□□ 2.56
GBX1-201ENST00000297537 CASZ1Q86V15 1759 aa31.03■■■□□ 2.56
GBX1-201ENST00000297537 RBM42Q9BTD8 480 aaKnown RBP31.03■■■□□ 2.56
GBX1-201ENST00000297537 ZNF831Q5JPB2 1677 aa31.03■■■□□ 2.56
GBX1-201ENST00000297537 WDR43Q15061 677 aaKnown RBP eCLIP31.02■■■□□ 2.56
GBX1-201ENST00000297537 NFE2L2Q16236 605 aa31.02■■■□□ 2.56
GBX1-201ENST00000297537 CCDC184Q52MB2 194 aa31.02■■■□□ 2.56
GBX1-201ENST00000297537 LINC00116Q8NCU8 138 aa31.02■■■□□ 2.56
GBX1-201ENST00000297537 TFCP2L1Q9NZI6 479 aa31.02■■■□□ 2.56
GBX1-201ENST00000297537 TEFQ10587 303 aa31.01■■■□□ 2.55
GBX1-201ENST00000297537 SLC39A6Q13433 755 aa31.01■■■□□ 2.55
GBX1-201ENST00000297537 RTF1Q92541 710 aaKnown RBP31.01■■■□□ 2.55
GBX1-201ENST00000297537 PNPLA7Q6ZV29 1317 aa31■■■□□ 2.55
GBX1-201ENST00000297537 MAPK8IP3Q9UPT6 1336 aa31■■■□□ 2.55
GBX1-201ENST00000297537 PTCD1O75127 700 aaKnown RBP31■■■□□ 2.55
GBX1-201ENST00000297537 MCM10Q7L590 875 aa31■■■□□ 2.55
GBX1-201ENST00000297537 C4BP0C0L5 1744 aa30.98■■■□□ 2.55
GBX1-201ENST00000297537 QSER1Q2KHR3 1735 aa30.98■■■□□ 2.55
GBX1-201ENST00000297537 DCTN1Q14203 1278 aa30.98■■■□□ 2.55
GBX1-201ENST00000297537 SIPA1L3O60292 1781 aaPredicted RBP30.97■■■□□ 2.55
GBX1-201ENST00000297537 LRP5O75197 1615 aa30.97■■■□□ 2.55
GBX1-201ENST00000297537 RUNDC1Q96C34 613 aa30.95■■■□□ 2.55
GBX1-201ENST00000297537 TUBGCP6Q96RT7 1819 aa30.95■■■□□ 2.55
GBX1-201ENST00000297537 KCPQ6ZWJ8 1503 aa30.94■■■□□ 2.54
GBX1-201ENST00000297537 ZNF790Q6PG37 636 aa30.94■■■□□ 2.54
GBX1-201ENST00000297537 CCDC146Q8IYE0 955 aa30.94■■■□□ 2.54
GBX1-201ENST00000297537 DLG5Q8TDM6 1919 aa30.94■■■□□ 2.54
GBX1-201ENST00000297537 TMPOP42166 694 aaKnown RBP30.93■■■□□ 2.54
GBX1-201ENST00000297537 RC3H1Q5TC82 1133 aaKnown RBP30.93■■■□□ 2.54
GBX1-201ENST00000297537 AMIGO3Q86WK7 504 aa30.93■■■□□ 2.54
GBX1-201ENST00000297537 AK7Q96M32 723 aa30.93■■■□□ 2.54
GBX1-201ENST00000297537 SPON1Q9HCB6 807 aa30.93■■■□□ 2.54
GBX1-201ENST00000297537 CICQ96RK0 1608 aaPredicted RBP30.92■■■□□ 2.54
GBX1-201ENST00000297537 ZBTB7AO95365 584 aa30.92■■■□□ 2.54
GBX1-201ENST00000297537 COL23A1Q86Y22 540 aaPredicted RBP30.92■■■□□ 2.54
GBX1-201ENST00000297537 BTBD11A6QL63 1104 aa30.91■■■□□ 2.54
GBX1-201ENST00000297537 RIPK4P57078 832 aa30.91■■■□□ 2.54
GBX1-201ENST00000297537 VSIG10Q8N0Z9 540 aa30.91■■■□□ 2.54
GBX1-201ENST00000297537 SLC16A10Q8TF71 515 aa30.91■■■□□ 2.54
GBX1-201ENST00000297537 MTFR1LQ9H019 292 aa30.91■■■□□ 2.54
GBX1-201ENST00000297537 FLAD1Q8NFF5 587 aa30.9■■■□□ 2.54
GBX1-201ENST00000297537 PNISRQ8TF01 805 aaKnown RBP30.9■■■□□ 2.54
GBX1-201ENST00000297537 CNTNAP4Q9C0A0 1308 aa30.9■■■□□ 2.54
GBX1-201ENST00000297537 COL5A3P25940 1745 aaPredicted RBP30.9■■■□□ 2.54
GBX1-201ENST00000297537 UBR2Q8IWV8 1755 aa30.89■■■□□ 2.54
GBX1-201ENST00000297537 TAF7Q15545 349 aaPredicted RBP30.89■■■□□ 2.54
GBX1-201ENST00000297537 TTC5Q8N0Z6 440 aa30.89■■■□□ 2.54
GBX1-201ENST00000297537 ZNF496Q96IT1 587 aaPredicted RBP30.88■■■□□ 2.53
GBX1-201ENST00000297537 UBR3Q6ZT12 1888 aa30.88■■■□□ 2.53
GBX1-201ENST00000297537 TJP1Q07157 1748 aa30.87■■■□□ 2.53
GBX1-201ENST00000297537 KCNQ3O43525 872 aa30.87■■■□□ 2.53
GBX1-201ENST00000297537 SSFA2P28290 1259 aa30.87■■■□□ 2.53
GBX1-201ENST00000297537 PTGER2P43116 358 aa30.87■■■□□ 2.53
GBX1-201ENST00000297537 DNAJC10Q8IXB1 793 aa30.87■■■□□ 2.53
GBX1-201ENST00000297537 ATF5Q9Y2D1 282 aaPredicted RBP30.87■■■□□ 2.53
GBX1-201ENST00000297537 GNPATO15228 680 aa30.86■■■□□ 2.53
GBX1-201ENST00000297537 SMIM5Q71RC9 77 aa30.86■■■□□ 2.53
GBX1-201ENST00000297537 SGIP1Q9BQI5 828 aa30.86■■■□□ 2.53
GBX1-201ENST00000297537 THUMPD2Q9BTF0 503 aaKnown RBP30.86■■■□□ 2.53
GBX1-201ENST00000297537 MRS2Q9HD23 443 aa30.86■■■□□ 2.53
GBX1-201ENST00000297537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.85■■■□□ 2.53
GBX1-201ENST00000297537 HEG1Q9ULI3 1381 aa30.84■■■□□ 2.53
GBX1-201ENST00000297537 CRKLP46109 303 aaKnown RBP30.84■■■□□ 2.53
GBX1-201ENST00000297537 RRP7AQ9Y3A4 280 aaKnown RBP30.84■■■□□ 2.53
GBX1-201ENST00000297537 MYH14Q7Z406 1995 aaKnown RBP30.84■■■□□ 2.53
GBX1-201ENST00000297537 RPS6KA4O75676 772 aa30.83■■■□□ 2.53
GBX1-201ENST00000297537 CYP19A1P11511 503 aaPredicted RBP30.83■■■□□ 2.53
GBX1-201ENST00000297537 INTS5Q6P9B9 1019 aaKnown RBP30.83■■■□□ 2.53
GBX1-201ENST00000297537 LMOD3Q0VAK6 560 aa30.82■■■□□ 2.52
GBX1-201ENST00000297537 FMNL2Q96PY5 1086 aa30.82■■■□□ 2.52
GBX1-201ENST00000297537 TRIM35Q9UPQ4 493 aa30.82■■■□□ 2.52
GBX1-201ENST00000297537 RTCBQ9Y3I0 505 aaKnown RBP30.82■■■□□ 2.52
GBX1-201ENST00000297537 PHF14O94880 888 aa30.81■■■□□ 2.52
GBX1-201ENST00000297537 NEUROD2Q15784 382 aa30.8■■■□□ 2.52
GBX1-201ENST00000297537 MIS18AQ9NYP9 233 aa30.8■■■□□ 2.52
GBX1-201ENST00000297537 MSH5O43196 834 aa30.79■■■□□ 2.52
GBX1-201ENST00000297537 COL24A1Q17RW2 1714 aa30.78■■■□□ 2.52
GBX1-201ENST00000297537 APAF1O14727 1248 aa30.78■■■□□ 2.52
GBX1-201ENST00000297537 ADRA2BP18089 450 aa30.78■■■□□ 2.52
GBX1-201ENST00000297537 TRAPPC3LQ5T215 181 aa30.78■■■□□ 2.52
GBX1-201ENST00000297537 TEX13AQ9BXU3 409 aaPredicted RBP30.78■■■□□ 2.52
GBX1-201ENST00000297537 CCDC87Q9NVE4 849 aa30.77■■■□□ 2.52
GBX1-201ENST00000297537 ARHGEF1Q92888 912 aaKnown RBP30.76■■■□□ 2.51
GBX1-201ENST00000297537 STARD3NLO95772 234 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms