RNA–Protein interactions for RNA: ENST00000296684.9

NDUFS4-201, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS4, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-201ENST00000296684 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
NDUFS4-201ENST00000296684 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
NDUFS4-201ENST00000296684 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
NDUFS4-201ENST00000296684 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 PPP2R1AP30153 589 aa13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 EZH2Q15910 746 aaKnown RBP13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
NDUFS4-201ENST00000296684 NHSQ6T4R5 1651 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 RALBP1Q15311 655 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 KDRP35968 1356 aa13.19□□□□□ -0.3
NDUFS4-201ENST00000296684 CYP27B1O15528 508 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 KCNQ2O43526 872 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 EP400Q96L91 3159 aa13.18□□□□□ -0.3
NDUFS4-201ENST00000296684 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
NDUFS4-201ENST00000296684 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
NDUFS4-201ENST00000296684 HMGB2P26583 209 aaKnown RBP13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
NDUFS4-201ENST00000296684 PHKG2P15735 406 aa13.15□□□□□ -0.3
NDUFS4-201ENST00000296684 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
NDUFS4-201ENST00000296684 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
NDUFS4-201ENST00000296684 RREB1Q92766 1687 aa13.15□□□□□ -0.31
NDUFS4-201ENST00000296684 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
NDUFS4-201ENST00000296684 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
NDUFS4-201ENST00000296684 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
NDUFS4-201ENST00000296684 BTAF1O14981 1849 aa13.13□□□□□ -0.31
NDUFS4-201ENST00000296684 U2SURPO15042 1029 aaKnown RBP13.13□□□□□ -0.31
NDUFS4-201ENST00000296684 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
NDUFS4-201ENST00000296684 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
NDUFS4-201ENST00000296684 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
NDUFS4-201ENST00000296684 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
NDUFS4-201ENST00000296684 HMOX1P09601 288 aa13.12□□□□□ -0.31
NDUFS4-201ENST00000296684 C1orf141Q5JVX7 400 aa13.12□□□□□ -0.31
NDUFS4-201ENST00000296684 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
NDUFS4-201ENST00000296684 FCHSD2O94868 740 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 MYBBP1AQ9BQG0 1328 aaKnown RBP13.11□□□□□ -0.31
NDUFS4-201ENST00000296684 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
NDUFS4-201ENST00000296684 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
NDUFS4-201ENST00000296684 ITGB4P16144 1822 aa13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
NDUFS4-201ENST00000296684 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 PIGBQ92521 554 aa13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 LY75O60449 1722 aa13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
NDUFS4-201ENST00000296684 CABP4P57796 275 aa13.07□□□□□ -0.32
NDUFS4-201ENST00000296684 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
NDUFS4-201ENST00000296684 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
NDUFS4-201ENST00000296684 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
NDUFS4-201ENST00000296684 NEFMP07197 916 aa13.06□□□□□ -0.32
NDUFS4-201ENST00000296684 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
NDUFS4-201ENST00000296684 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
NDUFS4-201ENST00000296684 SLC15A2Q16348 729 aa13.06□□□□□ -0.32
NDUFS4-201ENST00000296684 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
NDUFS4-201ENST00000296684 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
NDUFS4-201ENST00000296684 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
NDUFS4-201ENST00000296684 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
NDUFS4-201ENST00000296684 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
NDUFS4-201ENST00000296684 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
NDUFS4-201ENST00000296684 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
NDUFS4-201ENST00000296684 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
NDUFS4-201ENST00000296684 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
NDUFS4-201ENST00000296684 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 PAPPAQ13219 1627 aa13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
NDUFS4-201ENST00000296684 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms