RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 KIAA0232Q92628 1395 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
CLRN1-201ENST00000295911 CHL1O00533 1208 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 SOX12O15370 315 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
CLRN1-201ENST00000295911 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 GAS2L2Q8NHY3 880 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
CLRN1-201ENST00000295911 KIF1AQ12756 1690 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 FAM83GA6ND36 823 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 PSME1Q06323 249 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 SKAP1Q86WV1 359 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
CLRN1-201ENST00000295911 API5Q9BZZ5 524 aaKnown RBP11.72□□□□□ -0.53
CLRN1-201ENST00000295911 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
CLRN1-201ENST00000295911 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
CLRN1-201ENST00000295911 HOXC9P31274 260 aa11.71□□□□□ -0.53
CLRN1-201ENST00000295911 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
CLRN1-201ENST00000295911 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
CLRN1-201ENST00000295911 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
CLRN1-201ENST00000295911 EYA1Q99502 592 aa11.71□□□□□ -0.53
CLRN1-201ENST00000295911 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
CLRN1-201ENST00000295911 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
CLRN1-201ENST00000295911 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
CLRN1-201ENST00000295911 CRB1P82279 1406 aa11.7□□□□□ -0.54
CLRN1-201ENST00000295911 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 ESCO1Q5FWF5 840 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
CLRN1-201ENST00000295911 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
CLRN1-201ENST00000295911 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 ABCC4O15439 1325 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
CLRN1-201ENST00000295911 MCM10Q7L590 875 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 IP6K1Q92551 441 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 BABAM1Q9NWV8 329 aa11.69□□□□□ -0.54
CLRN1-201ENST00000295911 NFAT5O94916 1531 aa11.68□□□□□ -0.54
CLRN1-201ENST00000295911 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
CLRN1-201ENST00000295911 ZBTB7BO15156 539 aaPredicted RBP11.68□□□□□ -0.54
CLRN1-201ENST00000295911 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
CLRN1-201ENST00000295911 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
CLRN1-201ENST00000295911 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
CLRN1-201ENST00000295911 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
CLRN1-201ENST00000295911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
CLRN1-201ENST00000295911 GNAT3A8MTJ3 354 aa11.67□□□□□ -0.54
CLRN1-201ENST00000295911 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
CLRN1-201ENST00000295911 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
CLRN1-201ENST00000295911 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
CLRN1-201ENST00000295911 PTPRCP08575 1304 aa11.67□□□□□ -0.54
CLRN1-201ENST00000295911 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
CLRN1-201ENST00000295911 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
CLRN1-201ENST00000295911 SLIT3O75094 1523 aa11.65□□□□□ -0.54
CLRN1-201ENST00000295911 RGPD2P0DJD1 1756 aa11.65□□□□□ -0.54
CLRN1-201ENST00000295911 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
CLRN1-201ENST00000295911 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
CLRN1-201ENST00000295911 MAP3K5Q99683 1374 aa11.65□□□□□ -0.54
CLRN1-201ENST00000295911 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
CLRN1-201ENST00000295911 MST1RQ04912 1400 aa11.64□□□□□ -0.55
CLRN1-201ENST00000295911 LMO7Q8WWI1 1683 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 DCCP43146 1447 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 FOXO3O43524 673 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 NUCB1Q02818 461 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
CLRN1-201ENST00000295911 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
CLRN1-201ENST00000295911 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
CLRN1-201ENST00000295911 ALS2Q96Q42 1657 aa11.63□□□□□ -0.55
CLRN1-201ENST00000295911 C1orf167Q5SNV9 1468 aa11.62□□□□□ -0.55
CLRN1-201ENST00000295911 LTV1Q96GA3 475 aaPredicted RBP11.62□□□□□ -0.55
CLRN1-201ENST00000295911 ST18O60284 1047 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 TAF7Q15545 349 aaPredicted RBP11.61□□□□□ -0.55
CLRN1-201ENST00000295911 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
CLRN1-201ENST00000295911 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
CLRN1-201ENST00000295911 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 RGPD5Q99666 1765 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 USP19O94966 1318 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 CAMTA1Q9Y6Y1 1673 aa11.61□□□□□ -0.55
CLRN1-201ENST00000295911 GCP02774 474 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 ATF3P18847 181 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 MSH6P52701 1360 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
CLRN1-201ENST00000295911 CHD1LQ86WJ1 897 aa11.6□□□□□ -0.55
CLRN1-201ENST00000295911 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
CLRN1-201ENST00000295911 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
CLRN1-201ENST00000295911 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
CLRN1-201ENST00000295911 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
CLRN1-201ENST00000295911 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
CLRN1-201ENST00000295911 IL17REQ8NFR9 667 aa11.59□□□□□ -0.55
CLRN1-201ENST00000295911 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
CLRN1-201ENST00000295911 RGS12O14924 1447 aa11.58□□□□□ -0.56
CLRN1-201ENST00000295911 RGL2O15211 777 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms