RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 NUCB2P80303 420 aa7.65□□□□□ -1.19
VCAM1-201ENST00000294728 NRAPQ86VF7 1730 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 ZNF445P59923 1031 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 TBC1D9Q6ZT07 1266 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 SIRT2Q8IXJ6 389 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 ANKRD44Q8N8A2 993 aa7.64□□□□□ -1.19
VCAM1-201ENST00000294728 SSH2Q76I76 1423 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 PEAK1Q9H792 1746 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 ONECUT3O60422 494 aaPredicted RBP7.63□□□□□ -1.19
VCAM1-201ENST00000294728 RTN4Q9NQC3 1192 aaKnown RBP7.63□□□□□ -1.19
VCAM1-201ENST00000294728 CRYBG1Q9Y4K1 1723 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 GOLGA6L22H0YM25 854 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
VCAM1-201ENST00000294728 CCDC173Q0VFZ6 552 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 UNC5CLQ8IV45 518 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 MBIPQ9NS73 344 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 CABP1Q9NZU7 370 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 TTC22Q5TAA0 569 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
VCAM1-201ENST00000294728 TNS1Q9HBL0 1735 aaKnown RBP7.62□□□□□ -1.19
VCAM1-201ENST00000294728 HSP90AB1P08238 724 aaKnown RBP7.62□□□□□ -1.19
VCAM1-201ENST00000294728 TWISTNBQ3B726 338 aaPredicted RBP7.62□□□□□ -1.19
VCAM1-201ENST00000294728 TTC21BQ7Z4L5 1316 aa7.62□□□□□ -1.19
VCAM1-201ENST00000294728 CHL1O00533 1208 aa7.62□□□□□ -1.19
VCAM1-201ENST00000294728 LNPKQ9C0E8 428 aa7.62□□□□□ -1.19
VCAM1-201ENST00000294728 BABAM1Q9NWV8 329 aa7.62□□□□□ -1.19
VCAM1-201ENST00000294728 MINK1Q8N4C8 1332 aaPredicted RBP7.62□□□□□ -1.19
VCAM1-201ENST00000294728 DISP2A7MBM2 1401 aa7.62□□□□□ -1.19
VCAM1-201ENST00000294728 KDRP35968 1356 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 MCM2P49736 904 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 CRB1P82279 1406 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 USP26Q9BXU7 913 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 SPATA31A3Q5VYP0 1347 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 ESPNB1AK53 854 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 ANKRD45Q5TZF3 282 aa7.61□□□□□ -1.19
VCAM1-201ENST00000294728 AOX1Q06278 1338 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
VCAM1-201ENST00000294728 TPM2P07951 284 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 VPS72Q15906 364 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 PHACTR3Q96KR7 559 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 THSD7AQ9UPZ6 1657 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
VCAM1-201ENST00000294728 RRP9O43818 475 aaKnown RBP7.6□□□□□ -1.19
VCAM1-201ENST00000294728 GSPT1P15170 499 aaKnown RBP7.6□□□□□ -1.19
VCAM1-201ENST00000294728 MCM5P33992 734 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 ANAPC15P60006 121 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 CASC1Q6TDU7 716 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 CCDC61Q9Y6R9 512 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 PDLIM2Q96JY6 352 aa7.6□□□□□ -1.19
VCAM1-201ENST00000294728 TNS3Q68CZ2 1445 aa7.59□□□□□ -1.19
VCAM1-201ENST00000294728 REC8O95072 547 aa7.59□□□□□ -1.19
VCAM1-201ENST00000294728 BAG4O95429 457 aaKnown RBP7.59□□□□□ -1.19
VCAM1-201ENST00000294728 SALL3Q9BXA9 1300 aa7.59□□□□□ -1.19
VCAM1-201ENST00000294728 TRPM3Q9HCF6 1732 aaPredicted RBP7.59□□□□□ -1.19
VCAM1-201ENST00000294728 DEFB132Q7Z7B7 95 aa7.59□□□□□ -1.19
VCAM1-201ENST00000294728 COG3Q96JB2 828 aa7.59□□□□□ -1.19
VCAM1-201ENST00000294728 COL14A1Q05707 1796 aaKnown RBP7.59□□□□□ -1.2
VCAM1-201ENST00000294728 SBNO1A3KN83 1393 aa7.59□□□□□ -1.2
VCAM1-201ENST00000294728 RREB1Q92766 1687 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 CEP85Q6P2H3 762 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 TSPYL6Q8N831 410 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 INTS4Q96HW7 963 aaKnown RBP7.58□□□□□ -1.2
VCAM1-201ENST00000294728 TTC21AQ8NDW8 1320 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 ST18O60284 1047 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 HMMRO75330 724 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 ESCO1Q5FWF5 840 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 SEPT12Q8IYM1 358 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 USP6P35125 1406 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 AK9Q5TCS8 1911 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 CCT4P50991 539 aaKnown RBP7.58□□□□□ -1.2
VCAM1-201ENST00000294728 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
VCAM1-201ENST00000294728 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 PANK2Q9BZ23 570 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 STK26Q9P289 416 aa7.58□□□□□ -1.2
VCAM1-201ENST00000294728 ALS2Q96Q42 1657 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
VCAM1-201ENST00000294728 CUL4AQ13619 759 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 RGPD8O14715 1765 aaPredicted RBP7.57□□□□□ -1.2
VCAM1-201ENST00000294728 ZNF500O60304 480 aaPredicted RBP7.57□□□□□ -1.2
VCAM1-201ENST00000294728 ZSCAN30Q86W11 494 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 GAS2L3Q86XJ1 694 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
VCAM1-201ENST00000294728 SRCIN1Q9C0H9 1055 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 LMBRD1Q9NUN5 540 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 STAP2Q9UGK3 403 aa7.57□□□□□ -1.2
VCAM1-201ENST00000294728 KRT27Q7Z3Y8 459 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 KDM3BQ7LBC6 1761 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 FOXO3O43524 673 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 MBD3O95983 291 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 BAG6P46379 1132 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 TRIM44Q96DX7 344 aaPredicted RBP7.56□□□□□ -1.2
VCAM1-201ENST00000294728 ANKARQ7Z5J8 1434 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 PIK3C2AO00443 1686 aa7.56□□□□□ -1.2
VCAM1-201ENST00000294728 ERC2O15083 957 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 ANP32BQ92688 251 aaKnown RBP7.55□□□□□ -1.2
VCAM1-201ENST00000294728 EMILIN1Q9Y6C2 1016 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 NUP188Q5SRE5 1749 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms