RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.04
CLPB-201ENST00000294053 USP31Q70CQ4 1352 aa14.77□□□□□ -0.04
CLPB-201ENST00000294053 PIK3R4Q99570 1358 aa14.77□□□□□ -0.04
CLPB-201ENST00000294053 DIP2AQ14689 1571 aa14.77□□□□□ -0.04
CLPB-201ENST00000294053 G2E3Q7L622 706 aa14.77□□□□□ -0.04
CLPB-201ENST00000294053 SYCE3A1L190 88 aa14.77□□□□□ -0.05
CLPB-201ENST00000294053 F6X3S4 739 aa14.77□□□□□ -0.05
CLPB-201ENST00000294053 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
CLPB-201ENST00000294053 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
CLPB-201ENST00000294053 ZSCAN23Q3MJ62 389 aa14.76□□□□□ -0.05
CLPB-201ENST00000294053 THEMISQ8N1K5 641 aaPredicted RBP14.76□□□□□ -0.05
CLPB-201ENST00000294053 ZNF830Q96NB3 372 aaPredicted RBP14.76□□□□□ -0.05
CLPB-201ENST00000294053 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 RGS12O14924 1447 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
CLPB-201ENST00000294053 PPP1R9BQ96SB3 815 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 MEIS3Q99687 375 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
CLPB-201ENST00000294053 MSH6P52701 1360 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 CRB1P82279 1406 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
CLPB-201ENST00000294053 KLHL40Q2TBA0 621 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 SLC4A10Q6U841 1118 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 MAP7D2Q96T17 732 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
CLPB-201ENST00000294053 TSPYL4Q9UJ04 414 aa14.74□□□□□ -0.05
CLPB-201ENST00000294053 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
CLPB-201ENST00000294053 SMARCA5O60264 1052 aaPredicted RBP14.73□□□□□ -0.05
CLPB-201ENST00000294053 FLT4P35916 1363 aa14.73□□□□□ -0.05
CLPB-201ENST00000294053 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
CLPB-201ENST00000294053 TBC1D9Q6ZT07 1266 aa14.72□□□□□ -0.05
CLPB-201ENST00000294053 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
CLPB-201ENST00000294053 SBNO1A3KN83 1393 aa14.72□□□□□ -0.05
CLPB-201ENST00000294053 C17orf53Q8N3J3 647 aaPredicted RBP14.72□□□□□ -0.05
CLPB-201ENST00000294053 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
CLPB-201ENST00000294053 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
CLPB-201ENST00000294053 GSPT1P15170 499 aaKnown RBP14.71□□□□□ -0.05
CLPB-201ENST00000294053 PTMSP20962 102 aa14.71□□□□□ -0.05
CLPB-201ENST00000294053 GCC1Q96CN9 775 aa14.71□□□□□ -0.05
CLPB-201ENST00000294053 HOXC9P31274 260 aa14.71□□□□□ -0.05
CLPB-201ENST00000294053 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
CLPB-201ENST00000294053 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.06
CLPB-201ENST00000294053 SNX21Q969T3 373 aa14.71□□□□□ -0.06
CLPB-201ENST00000294053 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
CLPB-201ENST00000294053 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
CLPB-201ENST00000294053 INTS3Q68E01 1043 aaKnown RBP14.7□□□□□ -0.06
CLPB-201ENST00000294053 BMP2KLQ5H9B9 411 aa14.7□□□□□ -0.06
CLPB-201ENST00000294053 ZGPATQ8N5A5 531 aaKnown RBP14.7□□□□□ -0.06
CLPB-201ENST00000294053 ZKSCAN5Q9Y2L8 839 aa14.7□□□□□ -0.06
CLPB-201ENST00000294053 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
CLPB-201ENST00000294053 ARHGEF10O15013 1369 aa14.7□□□□□ -0.06
CLPB-201ENST00000294053 CEP85Q6P2H3 762 aa14.69□□□□□ -0.06
CLPB-201ENST00000294053 CSPP1Q1MSJ5 1256 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 KDRP35968 1356 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 DDIT3P35638 169 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 PLEKHM2Q8IWE5 1019 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 SASS6Q6UVJ0 657 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 IL17REQ8NFR9 667 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 KIF2CQ99661 725 aa14.68□□□□□ -0.06
CLPB-201ENST00000294053 XRN1Q8IZH2 1706 aaKnown RBP14.68□□□□□ -0.06
CLPB-201ENST00000294053 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
CLPB-201ENST00000294053 DCTPP1Q9H773 170 aa14.67□□□□□ -0.06
CLPB-201ENST00000294053 GDPD2Q9HCC8 539 aa14.67□□□□□ -0.06
CLPB-201ENST00000294053 DYNC1I1O14576 645 aa14.67□□□□□ -0.06
CLPB-201ENST00000294053 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
CLPB-201ENST00000294053 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.67□□□□□ -0.06
CLPB-201ENST00000294053 NSFL1CQ9UNZ2 370 aaKnown RBP14.67□□□□□ -0.06
CLPB-201ENST00000294053 MARF1Q9Y4F3 1742 aaKnown RBP14.67□□□□□ -0.06
CLPB-201ENST00000294053 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 ANKRD44Q8N8A2 993 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 ESCO1Q5FWF5 840 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 PPP4R3BQ5MIZ7 849 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 LMBRD1Q9NUN5 540 aa14.66□□□□□ -0.06
CLPB-201ENST00000294053 NUCB2P80303 420 aa14.65□□□□□ -0.06
CLPB-201ENST00000294053 SMAP1Q8IYB5 467 aaPredicted RBP14.65□□□□□ -0.06
CLPB-201ENST00000294053 LRRC59Q96AG4 307 aaKnown RBP14.65□□□□□ -0.06
CLPB-201ENST00000294053 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
CLPB-201ENST00000294053 KIAA2012Q0VF49 1180 aa14.65□□□□□ -0.06
CLPB-201ENST00000294053 TMEM63CQ9P1W3 806 aa14.65□□□□□ -0.06
CLPB-201ENST00000294053 GNAT3A8MTJ3 354 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
CLPB-201ENST00000294053 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
CLPB-201ENST00000294053 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
CLPB-201ENST00000294053 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
CLPB-201ENST00000294053 NBPF6Q5VWK0 638 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 NBPF4Q96M43 638 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 EXOC6BQ9Y2D4 811 aa14.64□□□□□ -0.07
CLPB-201ENST00000294053 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
CLPB-201ENST00000294053 LMOD2Q6P5Q4 547 aa14.63□□□□□ -0.07
CLPB-201ENST00000294053 ORAI2Q96SN7 254 aa14.63□□□□□ -0.07
CLPB-201ENST00000294053 PTPRCP08575 1304 aa14.63□□□□□ -0.07
CLPB-201ENST00000294053 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
CLPB-201ENST00000294053 LGR6Q9HBX8 967 aa14.62□□□□□ -0.07
CLPB-201ENST00000294053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLPB-201ENST00000294053 ZNF445P59923 1031 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms