RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 AMOTL2Q9Y2J4 779 aa20.66■□□□□ 0.9
CHRNE-201ENST00000293780 CAVIN1Q6NZI2 390 aaKnown RBP20.65■□□□□ 0.9
CHRNE-201ENST00000293780 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
CHRNE-201ENST00000293780 STK31Q9BXU1 1019 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 FLT4P35916 1363 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 FLIIQ13045 1269 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
CHRNE-201ENST00000293780 KDRP35968 1356 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
CHRNE-201ENST00000293780 NASPP49321 788 aaPredicted RBP20.64■□□□□ 0.9
CHRNE-201ENST00000293780 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.9
CHRNE-201ENST00000293780 IGSF1Q8N6C5 1336 aa20.64■□□□□ 0.89
CHRNE-201ENST00000293780 TTC21AQ8NDW8 1320 aa20.64■□□□□ 0.89
CHRNE-201ENST00000293780 SALL3Q9BXA9 1300 aa20.64■□□□□ 0.89
CHRNE-201ENST00000293780 NUTM2GQ5VZR2 741 aa20.63■□□□□ 0.89
CHRNE-201ENST00000293780 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
CHRNE-201ENST00000293780 NEK4P51957 841 aa20.63■□□□□ 0.89
CHRNE-201ENST00000293780 LRRCC1Q9C099 1032 aa20.63■□□□□ 0.89
CHRNE-201ENST00000293780 FOXD4L5Q5VV16 416 aaPredicted RBP20.62■□□□□ 0.89
CHRNE-201ENST00000293780 FOXD4L4Q8WXT5 416 aaPredicted RBP20.62■□□□□ 0.89
CHRNE-201ENST00000293780 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
CHRNE-201ENST00000293780 ATP8B2P98198 1209 aa20.61■□□□□ 0.89
CHRNE-201ENST00000293780 ZSCAN23Q3MJ62 389 aa20.61■□□□□ 0.89
CHRNE-201ENST00000293780 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
CHRNE-201ENST00000293780 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
CHRNE-201ENST00000293780 RILPL2Q969X0 211 aa20.61■□□□□ 0.89
CHRNE-201ENST00000293780 RBM27Q9P2N5 1060 aaKnown RBP20.61■□□□□ 0.89
CHRNE-201ENST00000293780 IBTKQ9P2D0 1353 aaPredicted RBP20.6■□□□□ 0.89
CHRNE-201ENST00000293780 MX1P20591 662 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 CCDC30Q5VVM6 783 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 GPT2Q8TD30 523 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 LRRFIP2Q9Y608 721 aaKnown RBP20.6■□□□□ 0.89
CHRNE-201ENST00000293780 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 NLRP6P59044 892 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 ZNF445P59923 1031 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 IL17REQ8NFR9 667 aa20.6■□□□□ 0.89
CHRNE-201ENST00000293780 RGPD8O14715 1765 aaPredicted RBP20.59■□□□□ 0.89
CHRNE-201ENST00000293780 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
CHRNE-201ENST00000293780 GNAI3P08754 354 aa20.59■□□□□ 0.89
CHRNE-201ENST00000293780 CCDC173Q0VFZ6 552 aa20.59■□□□□ 0.89
CHRNE-201ENST00000293780 UNC5CLQ8IV45 518 aa20.59■□□□□ 0.89
CHRNE-201ENST00000293780 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
CHRNE-201ENST00000293780 PPP1R9BQ96SB3 815 aa20.59■□□□□ 0.89
CHRNE-201ENST00000293780 CHMLP26374 656 aa20.58■□□□□ 0.89
CHRNE-201ENST00000293780 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.89
CHRNE-201ENST00000293780 ADAMTSL3P82987 1691 aa20.58■□□□□ 0.88
CHRNE-201ENST00000293780 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
CHRNE-201ENST00000293780 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
CHRNE-201ENST00000293780 ANO2Q9NQ90 1003 aa20.56■□□□□ 0.88
CHRNE-201ENST00000293780 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
CHRNE-201ENST00000293780 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
CHRNE-201ENST00000293780 HOXC9P31274 260 aa20.56■□□□□ 0.88
CHRNE-201ENST00000293780 RBSNQ9H1K0 784 aa20.56■□□□□ 0.88
CHRNE-201ENST00000293780 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
CHRNE-201ENST00000293780 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
CHRNE-201ENST00000293780 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
CHRNE-201ENST00000293780 XRN1Q8IZH2 1706 aaKnown RBP20.55■□□□□ 0.88
CHRNE-201ENST00000293780 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
CHRNE-201ENST00000293780 IL25Q9H293 177 aa20.54■□□□□ 0.88
CHRNE-201ENST00000293780 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
CHRNE-201ENST00000293780 TUBGCP6Q96RT7 1819 aa20.54■□□□□ 0.88
CHRNE-201ENST00000293780 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
CHRNE-201ENST00000293780 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
CHRNE-201ENST00000293780 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
CHRNE-201ENST00000293780 ANP32BQ92688 251 aaKnown RBP20.53■□□□□ 0.88
CHRNE-201ENST00000293780 FAM208AQ9UK61 1670 aaKnown RBP20.52■□□□□ 0.88
CHRNE-201ENST00000293780 TMEM63CQ9P1W3 806 aa20.52■□□□□ 0.88
CHRNE-201ENST00000293780 MAP4K4O95819 1239 aaPredicted RBP20.52■□□□□ 0.88
CHRNE-201ENST00000293780 MCCP23508 829 aa20.52■□□□□ 0.88
CHRNE-201ENST00000293780 TBX22Q9Y458 520 aa20.52■□□□□ 0.88
CHRNE-201ENST00000293780 DIP2AQ14689 1571 aa20.52■□□□□ 0.88
CHRNE-201ENST00000293780 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
CHRNE-201ENST00000293780 UPF3BQ9BZI7 483 aaKnown RBP20.51■□□□□ 0.87
CHRNE-201ENST00000293780 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
CHRNE-201ENST00000293780 LRRC37A3O60309 1634 aa20.51■□□□□ 0.87
CHRNE-201ENST00000293780 CUL4AQ13619 759 aa20.51■□□□□ 0.87
CHRNE-201ENST00000293780 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
CHRNE-201ENST00000293780 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
CHRNE-201ENST00000293780 BRD1O95696 1058 aa20.5■□□□□ 0.87
CHRNE-201ENST00000293780 GLIPR1L2Q4G1C9 344 aa20.5■□□□□ 0.87
CHRNE-201ENST00000293780 ABTB2Q8N961 1025 aa20.5■□□□□ 0.87
CHRNE-201ENST00000293780 MCM2P49736 904 aa20.49■□□□□ 0.87
CHRNE-201ENST00000293780 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
CHRNE-201ENST00000293780 SYCE3A1L190 88 aa20.49■□□□□ 0.87
CHRNE-201ENST00000293780 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
CHRNE-201ENST00000293780 SSH3Q8TE77 659 aa20.49■□□□□ 0.87
CHRNE-201ENST00000293780 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
CHRNE-201ENST00000293780 ANAPC15P60006 121 aa20.48■□□□□ 0.87
CHRNE-201ENST00000293780 FOXD4L6Q3SYB3 417 aaPredicted RBP20.48■□□□□ 0.87
CHRNE-201ENST00000293780 FOXD4L3Q6VB84 417 aaPredicted RBP20.48■□□□□ 0.87
CHRNE-201ENST00000293780 SURF6O75683 361 aaKnown RBP20.48■□□□□ 0.87
CHRNE-201ENST00000293780 ZSCAN30Q86W11 494 aa20.48■□□□□ 0.87
CHRNE-201ENST00000293780 SOS1Q07889 1333 aaPredicted RBP20.47■□□□□ 0.87
CHRNE-201ENST00000293780 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
CHRNE-201ENST00000293780 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
CHRNE-201ENST00000293780 LRSAM1Q6UWE0 723 aa20.46■□□□□ 0.87
CHRNE-201ENST00000293780 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
CHRNE-201ENST00000293780 NBPF7P0C2Y1 421 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms