RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RUNDC1Q96C34 613 aa35.61■■■■□ 3.29
SSU72-201ENST00000291386 ATG3Q9NT62 314 aa35.59■■■■□ 3.29
SSU72-201ENST00000291386 ASAP1Q9ULH1 1129 aa35.58■■■■□ 3.29
SSU72-201ENST00000291386 SIPA1L3O60292 1781 aaPredicted RBP35.58■■■■□ 3.29
SSU72-201ENST00000291386 RTF1Q92541 710 aaKnown RBP35.57■■■■□ 3.28
SSU72-201ENST00000291386 DIEXFQ68CQ4 756 aaKnown RBP35.56■■■■□ 3.28
SSU72-201ENST00000291386 CCDC146Q8IYE0 955 aa35.56■■■■□ 3.28
SSU72-201ENST00000291386 PAPPAQ13219 1627 aa35.56■■■■□ 3.28
SSU72-201ENST00000291386 LRRC4BQ9NT99 713 aa35.55■■■■□ 3.28
SSU72-201ENST00000291386 TMPOP42166 694 aaKnown RBP35.53■■■■□ 3.28
SSU72-201ENST00000291386 NBPF14Q5TI25 921 aa35.53■■■■□ 3.28
SSU72-201ENST00000291386 CCNL1Q9UK58 526 aaPredicted RBP35.53■■■■□ 3.28
SSU72-201ENST00000291386 ZNF831Q5JPB2 1677 aa35.52■■■■□ 3.28
SSU72-201ENST00000291386 TEFQ10587 303 aa35.52■■■■□ 3.28
SSU72-201ENST00000291386 HMGB2P26583 209 aaKnown RBP35.51■■■■□ 3.28
SSU72-201ENST00000291386 MCM10Q7L590 875 aa35.51■■■■□ 3.28
SSU72-201ENST00000291386 RIPK4P57078 832 aa35.49■■■■□ 3.27
SSU72-201ENST00000291386 TAF1LQ8IZX4 1826 aa35.48■■■■□ 3.27
SSU72-201ENST00000291386 LOC102724428A0A0B4J2F2 783 aa35.48■■■■□ 3.27
SSU72-201ENST00000291386 SIK1P57059 783 aa35.48■■■■□ 3.27
SSU72-201ENST00000291386 CCER2I3L3R5 266 aa35.47■■■■□ 3.27
SSU72-201ENST00000291386 DCTN1Q14203 1278 aa35.47■■■■□ 3.27
SSU72-201ENST00000291386 C5P01031 1676 aa35.46■■■■□ 3.27
SSU72-201ENST00000291386 LMOD3Q0VAK6 560 aa35.45■■■■□ 3.27
SSU72-201ENST00000291386 ANO8Q9HCE9 1232 aaPredicted RBP35.45■■■■□ 3.27
SSU72-201ENST00000291386 UBR2Q8IWV8 1755 aa35.44■■■■□ 3.26
SSU72-201ENST00000291386 KCNQ4P56696 695 aa35.44■■■■□ 3.26
SSU72-201ENST00000291386 CICQ96RK0 1608 aaPredicted RBP35.43■■■■□ 3.26
SSU72-201ENST00000291386 STK32BQ9NY57 414 aa35.42■■■■□ 3.26
SSU72-201ENST00000291386 SLC39A6Q13433 755 aa35.41■■■■□ 3.26
SSU72-201ENST00000291386 SLC15A2Q16348 729 aa35.41■■■■□ 3.26
SSU72-201ENST00000291386 AKT1S1Q96B36 256 aa35.41■■■■□ 3.26
SSU72-201ENST00000291386 SLC4A9Q96Q91 983 aa35.41■■■■□ 3.26
SSU72-201ENST00000291386 RRP7AQ9Y3A4 280 aaKnown RBP35.41■■■■□ 3.26
SSU72-201ENST00000291386 KCPQ6ZWJ8 1503 aa35.41■■■■□ 3.26
SSU72-201ENST00000291386 ATP6V1AP38606 617 aa35.4■■■■□ 3.26
SSU72-201ENST00000291386 RBM42Q9BTD8 480 aaKnown RBP35.4■■■■□ 3.26
SSU72-201ENST00000291386 APAF1O14727 1248 aa35.39■■■■□ 3.26
SSU72-201ENST00000291386 TAF7Q15545 349 aaPredicted RBP35.39■■■■□ 3.26
SSU72-201ENST00000291386 BTBD11A6QL63 1104 aa35.38■■■■□ 3.25
SSU72-201ENST00000291386 R3HDM1Q15032 1099 aaKnown RBP35.38■■■■□ 3.25
SSU72-201ENST00000291386 ZNF790Q6PG37 636 aa35.38■■■■□ 3.25
SSU72-201ENST00000291386 TRIM35Q9UPQ4 493 aa35.38■■■■□ 3.25
SSU72-201ENST00000291386 ITPK1Q13572 414 aa35.37■■■■□ 3.25
SSU72-201ENST00000291386 NEUROD2Q15784 382 aa35.37■■■■□ 3.25
SSU72-201ENST00000291386 C4BP0C0L5 1744 aa35.37■■■■□ 3.25
SSU72-201ENST00000291386 QSER1Q2KHR3 1735 aa35.37■■■■□ 3.25
SSU72-201ENST00000291386 PTCD1O75127 700 aaKnown RBP35.36■■■■□ 3.25
SSU72-201ENST00000291386 ZNF827Q17R98 1081 aa35.36■■■■□ 3.25
SSU72-201ENST00000291386 TTC5Q8N0Z6 440 aa35.36■■■■□ 3.25
SSU72-201ENST00000291386 COL5A3P25940 1745 aaPredicted RBP35.35■■■■□ 3.25
SSU72-201ENST00000291386 THUMPD2Q9BTF0 503 aaKnown RBP35.35■■■■□ 3.25
SSU72-201ENST00000291386 PSDA5PKW4 1024 aaPredicted RBP35.34■■■■□ 3.25
SSU72-201ENST00000291386 NCBP3Q53F19 620 aaKnown RBP35.34■■■■□ 3.25
SSU72-201ENST00000291386 FAM9BQ8IZU0 186 aa35.34■■■■□ 3.25
SSU72-201ENST00000291386 VSIG10Q8N0Z9 540 aa35.34■■■■□ 3.25
SSU72-201ENST00000291386 TJP1Q07157 1748 aa35.34■■■■□ 3.25
SSU72-201ENST00000291386 LINC00116Q8NCU8 138 aa35.33■■■■□ 3.25
SSU72-201ENST00000291386 KDM3BQ7LBC6 1761 aa35.32■■■■□ 3.24
SSU72-201ENST00000291386 MIER1Q8N108 512 aa35.31■■■■□ 3.24
SSU72-201ENST00000291386 TUBGCP6Q96RT7 1819 aa35.31■■■■□ 3.24
SSU72-201ENST00000291386 BABAM1Q9NWV8 329 aa35.3■■■■□ 3.24
SSU72-201ENST00000291386 ZNF496Q96IT1 587 aaPredicted RBP35.29■■■■□ 3.24
SSU72-201ENST00000291386 KCNQ3O43525 872 aa35.28■■■■□ 3.24
SSU72-201ENST00000291386 FMNL2Q96PY5 1086 aa35.28■■■■□ 3.24
SSU72-201ENST00000291386 CASZ1Q86V15 1759 aa35.28■■■■□ 3.24
SSU72-201ENST00000291386 HEG1Q9ULI3 1381 aa35.27■■■■□ 3.24
SSU72-201ENST00000291386 CCDC27Q2M243 656 aa35.27■■■■□ 3.24
SSU72-201ENST00000291386 RC3H1Q5TC82 1133 aaKnown RBP35.27■■■■□ 3.24
SSU72-201ENST00000291386 CNTNAP4Q9C0A0 1308 aa35.27■■■■□ 3.24
SSU72-201ENST00000291386 TFCP2L1Q9NZI6 479 aa35.26■■■■□ 3.24
SSU72-201ENST00000291386 UBR3Q6ZT12 1888 aa35.26■■■■□ 3.23
SSU72-201ENST00000291386 DNAJC10Q8IXB1 793 aa35.24■■■■□ 3.23
SSU72-201ENST00000291386 AK7Q96M32 723 aa35.24■■■■□ 3.23
SSU72-201ENST00000291386 MIS18AQ9NYP9 233 aa35.24■■■■□ 3.23
SSU72-201ENST00000291386 MYH14Q7Z406 1995 aaKnown RBP35.23■■■■□ 3.23
SSU72-201ENST00000291386 PNPLA7Q6ZV29 1317 aa35.23■■■■□ 3.23
SSU72-201ENST00000291386 TEX13AQ9BXU3 409 aaPredicted RBP35.22■■■■□ 3.23
SSU72-201ENST00000291386 FLAD1Q8NFF5 587 aa35.2■■■■□ 3.23
SSU72-201ENST00000291386 CHL1O00533 1208 aa35.19■■■■□ 3.22
SSU72-201ENST00000291386 CYP19A1P11511 503 aaPredicted RBP35.19■■■■□ 3.22
SSU72-201ENST00000291386 CALD1Q05682 793 aaKnown RBP35.19■■■■□ 3.22
SSU72-201ENST00000291386 NGEFQ8N5V2 710 aa35.19■■■■□ 3.22
SSU72-201ENST00000291386 CRKLP46109 303 aaKnown RBP35.18■■■■□ 3.22
SSU72-201ENST00000291386 TSPYL4Q9UJ04 414 aa35.18■■■■□ 3.22
SSU72-201ENST00000291386 SSFA2P28290 1259 aa35.17■■■■□ 3.22
SSU72-201ENST00000291386 EIF4A1P60842 406 aaKnown RBP35.17■■■■□ 3.22
SSU72-201ENST00000291386 CFAP44Q96MT7 982 aa35.17■■■■□ 3.22
SSU72-201ENST00000291386 PDGFDQ9GZP0 370 aaPredicted RBP35.17■■■■□ 3.22
SSU72-201ENST00000291386 GNPATO15228 680 aa35.16■■■■□ 3.22
SSU72-201ENST00000291386 SNRPA1P09661 255 aaKnown RBP35.16■■■■□ 3.22
SSU72-201ENST00000291386 RPS6KA4O75676 772 aa35.15■■■■□ 3.22
SSU72-201ENST00000291386 ZNF853P0CG23 659 aa35.15■■■■□ 3.22
SSU72-201ENST00000291386 INTS5Q6P9B9 1019 aaKnown RBP35.15■■■■□ 3.22
SSU72-201ENST00000291386 WWC1Q8IX03 1113 aa35.15■■■■□ 3.22
SSU72-201ENST00000291386 STARD3NLO95772 234 aa35.14■■■■□ 3.22
SSU72-201ENST00000291386 AMIGO3Q86WK7 504 aa35.14■■■■□ 3.22
SSU72-201ENST00000291386 COL23A1Q86Y22 540 aaPredicted RBP35.14■■■■□ 3.22
SSU72-201ENST00000291386 SLC16A10Q8TF71 515 aa35.13■■■■□ 3.21
SSU72-201ENST00000291386 CCDC87Q9NVE4 849 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms