RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PDE1AP54750 535 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 TAF7Q15545 349 aaPredicted RBP24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 PHF8Q9UPP1 1060 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 FSD2A1L4K1 749 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 CASC1Q6TDU7 716 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 XRCC6P12956 609 aaKnown RBP eCLIP24.59■■□□□ 1.53
SCUBE1-201ENST00000290460 ZBTB7CA1YPR0 619 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 SSFA2P28290 1259 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 GBP4Q96PP9 640 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 EIF5BO60841 1220 aaKnown RBP24.57■■□□□ 1.52
SCUBE1-201ENST00000290460 CHD2O14647 1828 aaKnown RBP24.57■■□□□ 1.52
SCUBE1-201ENST00000290460 GNAI3P08754 354 aa24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 OSBPL3Q9H4L5 887 aa24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 LRRFIP2Q9Y608 721 aaKnown RBP24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 PHAXQ9H814 394 aaKnown RBP24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 PANK2Q9BZ23 570 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 RGPD2P0DJD1 1756 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 HDGFL1Q5TGJ6 251 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 LRRCC1Q9C099 1032 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 TUBGCP6Q96RT7 1819 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 N4BP2Q86UW6 1770 aaPredicted RBP24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 PLEKHG5O94827 1062 aa24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 SALL3Q9BXA9 1300 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 ERC2O15083 957 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 REC8O95072 547 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 IP6K1Q92551 441 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 USP44Q9H0E7 712 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 LGR6Q9HBX8 967 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 NFAT5O94916 1531 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 IBTKQ9P2D0 1353 aaPredicted RBP24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 MX1P20591 662 aa24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 BABAM1Q9NWV8 329 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 CEMIPQ8WUJ3 1361 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 PSME1Q06323 249 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 ANKLE2Q86XL3 938 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
SCUBE1-201ENST00000290460 SOS1Q07889 1333 aaPredicted RBP24.49■■□□□ 1.51
SCUBE1-201ENST00000290460 KCNQ3O43525 872 aa24.48■■□□□ 1.51
SCUBE1-201ENST00000290460 PXDNLA1KZ92 1463 aa24.48■■□□□ 1.51
SCUBE1-201ENST00000290460 PKP1Q13835 747 aa24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 ST18O60284 1047 aa24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 XPCQ01831 940 aaPredicted RBP24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 EIF4A1P60842 406 aaKnown RBP24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 IL1RAPL2Q9NP60 686 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 TRIM6-TRIM34B2RNG4 842 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 ZGPATQ8N5A5 531 aaKnown RBP24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 BAG4O95429 457 aaKnown RBP24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 MED1Q15648 1581 aaPredicted RBP24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 KDM3BQ7LBC6 1761 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 ANXA1P04083 346 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 UNC5CLQ8IV45 518 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 ESYT1Q9BSJ8 1104 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 MRE11P49959 708 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 MPRIPQ6WCQ1 1025 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 GRPEL1Q9HAV7 217 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 ADGRL3Q9HAR2 1447 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 GAS2L3Q86XJ1 694 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 SRCIN1Q9C0H9 1055 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 SKOR2Q2VWA4 1001 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 ZNF530Q6P9A1 599 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 CLEC17AQ6ZS10 378 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 NBPF7P0C2Y1 421 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 SSH3Q8TE77 659 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 CHMLP26374 656 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PI4KAP2A4QPH2 592 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PI4KAP1Q8N8J0 262 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 KCNH5Q8NCM2 988 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 STAP2Q9UGK3 403 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PALD1Q9ULE6 856 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 GOLGA6L22H0YM25 854 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 NEK4P51957 841 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 TEFQ10587 303 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 BTBD11A6QL63 1104 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 SURF6O75683 361 aaKnown RBP24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 CYP2E1P05181 493 aaPredicted RBP24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 ANO2Q9NQ90 1003 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 PTMSP20962 102 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 NUCB2P80303 420 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 RRAGDQ9NQL2 400 aaPredicted RBP24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 PXDNQ92626 1479 aa24.39■■□□□ 1.49
SCUBE1-201ENST00000290460 MCTP1Q6DN14 999 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 SRGAP3O43295 1099 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 AKAP4Q5JQC9 854 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 DNAAF4Q8WXU2 420 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 MAP4K4O95819 1239 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms