RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 A1BGP04217 495 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 SLIT1O75093 1534 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
CCDC144B-201ENST00000285176 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 CASC1Q6TDU7 716 aa11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 CHL1O00533 1208 aa11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 PHF14O94880 888 aa11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 PROSER3Q2NL68 480 aa11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 IFT172Q9UG01 1749 aa11.21□□□□□ -0.61
CCDC144B-201ENST00000285176 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 XAGE3Q8WTP9 111 aa11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 TBC1D2BQ9UPU7 963 aa11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 SRGAP3O43295 1099 aa11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 SMIM5Q71RC9 77 aa11.21□□□□□ -0.62
CCDC144B-201ENST00000285176 HMMRO75330 724 aa11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 ZNF790Q6PG37 636 aa11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 CYP27B1O15528 508 aa11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
CCDC144B-201ENST00000285176 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 ASAP1Q9ULH1 1129 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 MYOM1P52179 1685 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 USP21Q9UK80 565 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
CCDC144B-201ENST00000285176 PHKG2P15735 406 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 SLKQ9H2G2 1235 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 ANKARQ7Z5J8 1434 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 UBE3BQ7Z3V4 1068 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 USP19O94966 1318 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 GNAI2P04899 355 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 DNAAF4Q8WXU2 420 aa11.18□□□□□ -0.62
CCDC144B-201ENST00000285176 KCNJ4P48050 445 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 IL16Q14005 1332 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
CCDC144B-201ENST00000285176 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 HSPA1LP34931 641 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 CDK12Q9NYV4 1490 aaPredicted RBP11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 SNRPA1P09661 255 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
CCDC144B-201ENST00000285176 A0A087WZG4 1122 aa11.15□□□□□ -0.62
CCDC144B-201ENST00000285176 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-201ENST00000285176 WDR17Q8IZU2 1322 aa11.15□□□□□ -0.62
CCDC144B-201ENST00000285176 MST1RQ04912 1400 aa11.15□□□□□ -0.62
CCDC144B-201ENST00000285176 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.63
CCDC144B-201ENST00000285176 NEURL4Q96JN8 1562 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 MED14O60244 1454 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 GNAI3P08754 354 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 NBPF7P0C2Y1 421 aaPredicted RBP11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 KIF6Q6ZMV9 814 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 PPP1R1BQ9UD71 204 aaPredicted RBP11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 KCNQ2O43526 872 aa11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC144B-201ENST00000285176 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 STARD3NLO95772 234 aa11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 USP31Q70CQ4 1352 aa11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 PPP1R42Q7Z4L9 355 aa11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 OTUD7AQ8TE49 926 aaPredicted RBP11.13□□□□□ -0.63
CCDC144B-201ENST00000285176 TTLL7Q6ZT98 887 aa11.12□□□□□ -0.63
CCDC144B-201ENST00000285176 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
CCDC144B-201ENST00000285176 FRAT2O75474 233 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-201ENST00000285176 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-201ENST00000285176 CHD1LQ86WJ1 897 aa11.12□□□□□ -0.63
CCDC144B-201ENST00000285176 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms